CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	97.8	79.52
KRH22445	Soybean	peroxisome	9.29	74.51
KRH62788	Soybean	cytosol	24.45	61.73
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	76.53	54.43
Solyc07g054670.2.1	Tomato	unclear	73.35	52.17
CDY38082	Canola	mitochondrion	71.88	51.13
KRH49945	Soybean	mitochondrion	72.37	51.03
CDX70722	Canola	plastid	71.39	50.96
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	71.64	50.96
CDX78714	Canola	plastid	71.39	50.87
KRH41931	Soybean	mitochondrion	72.13	50.86
Bra006374.1-P	Field mustard	plastid	71.15	50.7
KRH10751	Soybean	mitochondrion	71.39	50.69
Bra023586.1-P	Field mustard	mitochondrion	69.68	50.53
KRH21576	Soybean	mitochondrion	71.15	50.52
AT2G20800.1	Thale cress	mitochondrion	71.15	50.0
EES01568	Sorghum	mitochondrion	69.19	48.96
Os05t0331200-01	Rice	mitochondrion	68.7	48.87
Zm00001d043266_P002	Maize	mitochondrion	68.95	48.79
TraesCS7B01G206900.1	Wheat	mitochondrion	68.46	48.61
TraesCS7A01G306600.1	Wheat	mitochondrion	68.46	48.61
TraesCS7D01G303500.1	Wheat	golgi	68.46	48.61
EES14522	Sorghum	mitochondrion	68.95	48.54
Zm00001d012615_P001	Maize	mitochondrion	68.46	48.44
TraesCS3B01G350200.1	Wheat	mitochondrion	67.24	48.25
GSMUA_Achr4P33660_001	Banana	mitochondrion	67.73	47.84
TraesCS3D01G314700.1	Wheat	mitochondrion	66.99	47.82
TraesCS3A01G316500.1	Wheat	mitochondrion	66.99	47.82
Zm00001d049597_P001	Maize	mitochondrion	68.95	47.64
GSMUA_Achr3P22940_001	Banana	mitochondrion	66.75	47.15
KRH25490	Soybean	mitochondrion	63.33	45.2
KRH56037	Soybean	extracellular, plasma membrane	36.43	44.21
Os08t0141400-01	Rice	mitochondrion	30.32	34.73
KRH17976	Soybean	cytosol	14.18	29.9
Zm00001d004457_P001	Maize	mitochondrion	11.25	28.57
GSMUA_Achr10P...	Banana	mitochondrion	66.75	27.91
KRH17048	Soybean	mitochondrion	28.61	24.12
KRH72693	Soybean	mitochondrion	28.36	23.92
KRG98274	Soybean	mitochondrion	28.12	22.73
KRH30292	Soybean	mitochondrion	28.12	22.59
KRH49960	Soybean	mitochondrion	29.1	21.64
KRH41912	Soybean	mitochondrion	28.36	21.09
KRH26903	Soybean	mitochondrion	7.58	13.14

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	UniProt:A0A0R0H3V8	EMBL:ACUP02007266	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	EnsemblPlantsGene:GLYMA_12G106900	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR036188	EnsemblPlants:KRH25488	ProteinID:KRH25488	ProteinID:KRH25488.1	PFAM:PF07992
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF51905	UniParc:UPI0006EDA6DB	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:9796049..9800451

Molecular Weight (calculated)

46377.7 Da

IEP (calculated)

8.077

GRAVY (calculated)

-0.321

Length

409 amino acids

Sequence
(BLAST)

001: MGGRSNTFNT PGVQEHAHFL KEVDEALKIR HSVVDLFERA SLPSLPVEEK KKLLSFVVVG GGPTGVEFAA ELHDFVLEDM AKLYPSLKDY VKITLLEAGD
101: HILNMFDKRI TEFAEQKFAR DGIDVRLGSM VVKVGENEIT AKERASGQVV SIPHGMVVWS TGIGARPEVV EFMKQLGQVN RRALVTDEWL RVEGSDNIYA
201: LGDCATINQR RVMEDIAVIF SKADKNNSGK LDLKEFKDVV GDIIERYPQV DIYLKKNQMR DMASLLKKSQ ESNIIVDIEY FKEALSKVDS QMKNLPATAQ
301: VAAQQGVYLA DCFNRMEECE KYPEGPLRFR GVGRHRFRPF RYRHLGQFAP LGGEQTAAQL PGDWISIGQS TQWLWYSVYT SKQVSWRTRF LVVGDWGRRF
401: IFGRDSSKI

Best Arabidopsis Sequence Match ( AT2G20800.1 )
(BLAST)

001: MSFHSFYQRA SSLFKAYPST SKILLLSTFS GGGGVLVYSD SNPLKRILHA DATLDSDGNP IRKKKVVVLG SGWSGYSFLS YLNNPNYDVQ VVSPRNFFLF
101: TPLLPSVTNG TVEARSIVEP IRGLMRKKGF EYKEAECVKI DASNKKIHCR SKEGSSLKGT TEFDMDYDIL ILAVGAKPNT FNTPGVEEHA YFLKEAEDAL
201: NIRHSVIDCF ERASLPNLTE EERKKILHFV VVGGGPTGVE FSAELHDFLV QDVAKIYPKV QEFTKITLLE AGDHILNMFD KRITAFAEEK FQRDGIDLKT
301: GSMVVGVTAD EISTKERETG KIVSEPYGMV VWSTGIGSRP VIKDFMQQIG QGQRRVLATD EWLRVEGCDG VYALGDTATI NQRRVMEDIA AIFNKADKGN
401: TGTLKKKDFN SVVKDICQRY PQVELYLKKN KLKNIANLLK SANGEDTQVN IEKFKQALSE VDSQMKNLPA TAQVASQQGK YLAKCFNKME KCEKKPEGPL
501: RFRGEGRHRF QPFRYRHFGS FAPLGGEQTA AELPGDWVSI GHSSQWLWYS VYASKLVSWR TRMLVISDWT RRFVFGRDSS SI

Arabidopsis Description

NDB4External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.