CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17048	Soybean	mitochondrion	96.29	96.29
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	66.39	79.31
VIT_19s0027g01030.t01	Wine grape	cytosol	47.42	77.7
KRG98274	Soybean	mitochondrion	81.03	77.67
CDY70466	Canola	mitochondrion, peroxisome	55.67	77.14
KRH30292	Soybean	mitochondrion	80.21	76.42
VIT_06s0004g06760.t01	Wine grape	plastid	78.56	76.35
Bra022768.1-P	Field mustard	mitochondrion	75.26	72.42
CDX84870	Canola	mitochondrion	75.26	72.42
Solyc06g007160.2.1	Tomato	plastid	73.81	72.32
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	73.61	72.12
AT2G29990.1	Thale cress	mitochondrion	75.05	71.65
AT1G07180.1	Thale cress	mitochondrion	74.23	70.59
CDY10256	Canola	mitochondrion	73.81	70.33
CDY15606	Canola	plastid	73.2	70.3
CDX86494	Canola	mitochondrion, peroxisome	73.2	70.16
Bra015560.1-P	Field mustard	mitochondrion	73.61	70.14
Bra030676.1-P	Field mustard	plastid	72.99	70.1
CDY06685	Canola	mitochondrion	73.4	69.94
KRH41912	Soybean	mitochondrion	69.69	61.45
KRH49960	Soybean	mitochondrion	69.69	61.45
KRH17976	Soybean	cytosol	24.12	60.31
KRH22445	Soybean	peroxisome	3.71	35.29
KRH26903	Soybean	mitochondrion	15.26	31.36
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	31.75	30.62
KRH49945	Soybean	mitochondrion	36.08	30.17
KRH41931	Soybean	mitochondrion	35.88	30.0
KRH25490	Soybean	mitochondrion	35.26	29.84
KRH21576	Soybean	mitochondrion	34.85	29.34
KRH10751	Soybean	mitochondrion	34.64	29.17
KRH25488	Soybean	peroxisome	23.92	28.36
KRH56037	Soybean	extracellular, plasma membrane	14.43	20.77
KRH62788	Soybean	cytosol	5.15	15.43

Protein Annotations

EntrezGene:100796490	MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:ACUP02001231	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
EnsemblPlantsGene:GLYMA_02G227700	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:I1JHD9	InterPro:IPR036188	EnsemblPlants:KRH72693	ProteinID:KRH72693	ProteinID:KRH72693.1
ProteinID:KRH72694.1	ProteinID:KRH72695.1	ProteinID:KRH72696.1	ProteinID:KRH72697.1	ProteinID:KRH72698.1	PFAM:PF07992
PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	SUPFAM:SSF51905	UniParc:UPI0002337861	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:41445228..41452828

Molecular Weight (calculated)

53650.7 Da

IEP (calculated)

9.241

GRAVY (calculated)

-0.034

Length

485 amino acids

Sequence
(BLAST)

001: MSWLRHLSSK FSSTTITSTR RFTSLSRFST STAPARHAGL GPTQAHEKPR VVVLGSGWAG CRLMKGLDTA IYDVVCVSPR NHMVFTPLLA STCVGTLEFR
101: TVAEPIARIQ PAISREPGSY FFLANCTAID ADNHVVHCES VTEGAQAPDP WRFTVSYDKL VIALGAQPTT FGIHGVYEHA IFLREVYHAQ EIRRKLLLNL
201: MMSDVPGIEE EEKQRLLHCV VVGGGPTGVE FSGELSDFIV RDVRQRYAHV KDYIHVTLIE ANEILSSFDV RLRQYATNQL TKSGVRLVRG IVKDVEEKKI
301: ILNDGTEVPY GLLVWSTGVG PSAIIRSLDL PKAPGGRIGI DEWLRVPTVE DIFSIGDCSG FVESTGKTPL PALAQVAERQ GKYLGILLNK IGKANGGRAN
401: SAKDVDFGDQ FVYKHMGSMA SIGSYKALVD LRQNKEGKGL SLAGFVSWFI WRSAYLTRVI SWRNRFYVAI NWATTLVFGR DISRI

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.