CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49960	Soybean	mitochondrion	95.09	95.09
GSMUA_Achr7P00100_001	Banana	mitochondrion	60.73	82.67
KRH17976	Soybean	cytosol	27.64	78.35
VIT_00s0301g00090.t01	Wine grape	mitochondrion	74.73	75.27
PGSC0003DMT400057603	Potato	mitochondrion	71.82	72.21
Solyc02g078900.2.1	Tomato	plastid	71.82	72.21
KRH72693	Soybean	mitochondrion	61.45	69.69
KRH17048	Soybean	mitochondrion	61.27	69.48
GSMUA_Achr5P28430_001	Banana	plastid	71.27	68.06
Os07t0564500-01	Rice	mitochondrion	68.36	66.9
TraesCS2B01G230300.1	Wheat	plastid	67.64	66.43
HORVU2Hr1G040130.1	Barley	peroxisome	60.0	66.13
TraesCS2D01G212500.1	Wheat	plastid	67.27	66.07
TraesCS2A01G203200.1	Wheat	plastid	67.27	66.07
KRG98274	Soybean	mitochondrion	60.18	65.42
KRH30292	Soybean	mitochondrion	60.18	65.03
EER97387	Sorghum	mitochondrion	66.73	64.84
Zm00001d021804_P001	Maize	mitochondrion	59.64	54.21
KRH22445	Soybean	peroxisome	3.09	33.33
KRH26903	Soybean	mitochondrion	13.09	30.51
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	27.82	30.42
KRH49945	Soybean	mitochondrion	31.82	30.17
KRH41931	Soybean	mitochondrion	31.64	30.0
KRH21576	Soybean	mitochondrion	31.27	29.86
KRH10751	Soybean	mitochondrion	30.91	29.51
KRH25490	Soybean	mitochondrion	30.36	29.14
KRH25488	Soybean	peroxisome	21.09	28.36
KRH56037	Soybean	extracellular, plasma membrane	11.82	19.29
KRH62788	Soybean	cytosol	4.73	16.05

Protein Annotations

EntrezGene:100805330	MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:ACUP02004781	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
EnsemblPlantsGene:GLYMA_08G058000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036188	UniProt:K7L561	EnsemblPlants:KRH41912	ProteinID:KRH41912	ProteinID:KRH41912.1
PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	SUPFAM:SSF51905	UniParc:UPI0002338CC4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:4453573..4458801

Molecular Weight (calculated)

61171.3 Da

IEP (calculated)

8.874

GRAVY (calculated)

-0.210

Length

550 amino acids

Sequence
(BLAST)

001: MALARIARAN LRRSGGALGS SAHEKDMFNV GGYTSRSNIP SHKFFESDRK FSYVPRIKEQ NYINFSMRGI SGTPYDHFPS ASTQTVIEES EYEFESDRQR
101: YAGLQPTKPG EKPRVVVIGT GWAACRFLKG IDTRIYDVVC ISPRNHMVFT PLLASTCVGT LEFRTVAEPV SRIQDSLARD PNSYFFLASC TGIDTGKHEI
201: YCEAVNNGGL PQEPYQFKVA YDKLVIASGS EPLTFGIKGV KENAFFLREV NHAQEIRKRL LLNLMLSENP GISEEDKKRL LHCVVIGGGP TGVEFSGELS
301: DFIMRDVQER YTHVKDYIHV TLIEANEILS SFDVSLRQYA TKHLTKSGVR LMRGVVKEVH PKKIILSDGT EVPYGLLVWS TGVGASEFVK TLDLPKSQGG
401: RIGVDDWLRV PSVEDVFALG DCAGFLEHTG RPVLPALAQV AERQGKFLVE LFDEIGNQNG GKAYSAKGMP LGEPFVYKHL GSMASVGGYK ALVDLRQSKD
501: SKGLSLAGFV SWMIWRSAYL TRVLSWRNRF YVAVNWATTL VFGRDNSRIG

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.