Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00100_001 | Banana | mitochondrion | 63.72 | 90.84 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 54.86 | 77.83 |
| VIT_00s0301g00090.t01 | Wine grape | mitochondrion | 70.49 | 74.36 |
| KRH49960 | Soybean | mitochondrion | 68.58 | 71.82 |
| KRH41912 | Soybean | mitochondrion | 68.06 | 71.27 |
| Solyc02g078900.2.1 | Tomato | plastid | 65.62 | 69.1 |
| PGSC0003DMT400057603 | Potato | mitochondrion | 65.45 | 68.92 |
| HORVU2Hr1G040130.1 | Barley | peroxisome | 58.51 | 67.54 |
| TraesCS2D01G212500.1 | Wheat | plastid | 65.62 | 67.5 |
| TraesCS2A01G203200.1 | Wheat | plastid | 65.62 | 67.5 |
| TraesCS2B01G230300.1 | Wheat | plastid | 65.45 | 67.32 |
| EER97387 | Sorghum | mitochondrion | 66.15 | 67.31 |
| Os07t0564500-01 | Rice | mitochondrion | 65.45 | 67.08 |
| Zm00001d021804_P001 | Maize | mitochondrion | 59.03 | 56.2 |
| GSMUA_Achr3P22940_001 | Banana | mitochondrion | 31.6 | 31.43 |
| GSMUA_Achr4P33660_001 | Banana | mitochondrion | 30.56 | 30.4 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.42 | 18.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28430_001 | EnsemblPlants:GSMUA_Achr5T28430_001 | EnsemblPlantsGene:GSMUA_Achr5G28430_001 | Gene3D:3.50.50.100 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom |
| InterPro:IPR036188 | PANTHER:PTHR43706 | PANTHER:PTHR43706:SF4 | PFAM:PF07992 | PRINTS:PR00368 | SEG:seg |
| SUPFAM:SSF51905 | UniParc:UPI0002955D37 | UniProt:M0T2G7 | MapMan:2.4.2.1.1 | : | : |
Description
Putative Probable NADH dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G28430_001]
Coordinates
chr5:+:28628565..28631357
Molecular Weight (calculated)
63047.1 Da
IEP (calculated)
8.736
GRAVY (calculated)
-0.086
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGACQSAAL PSSSTVSPPS SRCHLFTASM ALSKIAKTAF SRSQGRIASE NCVHRMGLLR RGLPASQPYH TLLPSMMASD GFSRIRRADV FGVESRGISH
101: TPSREYPPTA QAIEDDLYVE ADDGARLPGL EPTKPGEKPR VVVLGTGWAG CRFLKGLDAK LYDIVCISPR NHMVFTPLLA STCVGTLEFR SVAEPVGRIQ
201: SALAGAPDSY FYLANCTGID TDKHEVHCES VPGTGLPYDP YRFKVAYDKL VIAAGADPLT FGIKGVREHA MFLREVHHAQ EIRRKLLLNL MLSESPGISE
301: EEKKRLLHCV VIGGGPTGVE FSGELSDFIM RDVRQRYSHV KDHIQVTLIE ANEILSSFDI GLRQYATNHL TKSGVRLVRG VVKEVLPEKI LLSDGSCVPY
401: GLLVWSTGVG PSEFVKSLDL PKAPGGRIGV DEWLRVPSVE DVFALGDCAG FLEHTGKPVL PALAQVAERE GKYLANMFNE IGKQNGGKAH CAGNITMGDP
501: FVYRHLGSMA SVGRYKALVD LRQSKDAKGI SMAGFISWFI WRSAYLTRVV SWRNRFYVAV NWATTLVFGR DNSRIG
101: TPSREYPPTA QAIEDDLYVE ADDGARLPGL EPTKPGEKPR VVVLGTGWAG CRFLKGLDAK LYDIVCISPR NHMVFTPLLA STCVGTLEFR SVAEPVGRIQ
201: SALAGAPDSY FYLANCTGID TDKHEVHCES VPGTGLPYDP YRFKVAYDKL VIAAGADPLT FGIKGVREHA MFLREVHHAQ EIRRKLLLNL MLSESPGISE
301: EEKKRLLHCV VIGGGPTGVE FSGELSDFIM RDVRQRYSHV KDHIQVTLIE ANEILSSFDI GLRQYATNHL TKSGVRLVRG VVKEVLPEKI LLSDGSCVPY
401: GLLVWSTGVG PSEFVKSLDL PKAPGGRIGV DEWLRVPSVE DVFALGDCAG FLEHTGKPVL PALAQVAERE GKYLANMFNE IGKQNGGKAH CAGNITMGDP
501: FVYRHLGSMA SVGRYKALVD LRQSKDAKGI SMAGFISWFI WRSAYLTRVV SWRNRFYVAV NWATTLVFGR DNSRIG
001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
Arabidopsis Description
NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.