Factsheet for HORVU2Hr1G040130.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00100_001	Banana	mitochondrion	65.33	80.69
TraesCS2B01G230300.1	Wheat	plastid	83.97	74.82
TraesCS2A01G203200.1	Wheat	plastid	83.77	74.64
TraesCS2D01G212500.1	Wheat	plastid	83.57	74.46
EER97387	Sorghum	mitochondrion	74.95	66.08
Os07t0564500-01	Rice	mitochondrion	74.15	65.84
HORVU3Hr1G110990.1	Barley	peroxisome	12.02	63.83
VIT_00s0301g00090.t01	Wine grape	mitochondrion	66.93	61.17
KRH41912	Soybean	mitochondrion	66.13	60.0
KRH49960	Soybean	mitochondrion	65.53	59.45
Solyc02g078900.2.1	Tomato	plastid	64.73	59.05
PGSC0003DMT400057603	Potato	mitochondrion	64.33	58.68
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	19.04	58.64
GSMUA_Achr5P28430_001	Banana	plastid	67.54	58.51
HORVU2Hr1G022740.3	Barley	extracellular	15.83	57.66
HORVU3Hr1G087850.7	Barley	peroxisome	58.92	56.11
Zm00001d021804_P001	Maize	mitochondrion	65.33	53.88
HORVU2Hr1G101830.2	Barley	extracellular	16.83	52.83
HORVU7Hr1G040660.4	Barley	cytosol	20.44	52.04
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	28.46	50.9
HORVU5Hr1G020920.4	Barley	extracellular	17.84	50.86
HORVU5Hr1G056500.3	Barley	extracellular	17.23	49.14
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	32.46	27.65
HORVU7Hr1G073050.3	Barley	plastid	33.47	27.24
HORVU3Hr1G076920.2	Barley	mitochondrion	32.67	26.68
HORVU4Hr1G058410.1	Barley	nucleus	17.03	25.07

Protein Annotations

EnsemblPlants:HORVU2Hr1G040130.1	EnsemblPlantsGene:HORVU2Hr1G040130	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:IPR036188
ncoils:Coil	PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	PFAM:PF07992	PRINTS:PR00368	SEG:seg
SUPFAM:SSF51905	UniParc:UPI000B46F933	UniProt:A0A287HSD7	MapMan:2.4.2.1.1	:	:

Description

No Description!

Coordinates

chrchr2H:+:194191654..194193786

Molecular Weight (calculated)

47709.5 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.080

Length

499 amino acids

Sequence
(BLAST)

001: EGGLSXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXFLKDVDT SAYDVVCVSP RNHMVFTPLL
101: ASTCVGTLEF RSVVEPVSRI QPALSTRPGS YFFLANCTGI DTRKHEVYCT VAAGDEQLPA NPYRFRVAYD KLVIASGAEP LTFNIKGVQE NAIFLREVNE
201: AQQIRRKLLT NLMLSENPGL SEAEKKRLLH CVVVGGGPTG VEFSGELSDF IMRDVRDRYA HVKDYVKVTL IEANEILSSF DVGLRQYATN HLSKYGVKLV
301: RGVVKEVLPK EIVLSDGTHV PYGLLVWSTG VGPSEFVKSL DLPKSPGGRI GIDEYLRVPS VEDVYALGDC SGFLESTKRP VLPALAQVAE REGKYLAQLF
401: KKLAAQNDGG RAHCGKRADL GEPFVYKHIG SMASVGRYKA LVDLRENKDA RGVSMAGFLS WLMWRSAYLT RVVSWRNRFY VAVNWATTIV FGRDNTRIG

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.