Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G316500.1 | Wheat | mitochondrion | 90.51 | 96.51 |
| TraesCS3D01G314700.1 | Wheat | mitochondrion | 90.18 | 96.16 |
| TraesCS3B01G350200.1 | Wheat | mitochondrion | 89.69 | 96.14 |
| Os05t0331200-01 | Rice | mitochondrion | 83.96 | 89.22 |
| Zm00001d043266_P002 | Maize | mitochondrion | 82.16 | 86.85 |
| Zm00001d012615_P001 | Maize | mitochondrion | 82.0 | 86.68 |
| EES01568 | Sorghum | mitochondrion | 81.83 | 86.51 |
| GSMUA_Achr4P33660_001 | Banana | mitochondrion | 68.9 | 72.71 |
| HORVU7Hr1G073050.3 | Barley | plastid | 67.76 | 67.54 |
| HORVU7Hr1G101500.4 | Barley | endoplasmic reticulum | 59.25 | 61.77 |
| HORVU2Hr1G040130.1 | Barley | peroxisome | 26.68 | 32.67 |
| HORVU3Hr1G087850.7 | Barley | peroxisome | 26.19 | 30.53 |
| HORVU2Hr1G022740.3 | Barley | extracellular | 5.89 | 26.28 |
| HORVU7Hr1G076330.1 | Barley | mitochondrion, peroxisome | 11.62 | 25.45 |
| HORVU7Hr1G040660.4 | Barley | cytosol | 7.86 | 24.49 |
| HORVU5Hr1G020920.4 | Barley | extracellular | 6.38 | 22.29 |
| HORVU3Hr1G087950.4 | Barley | endoplasmic reticulum, vacuole | 5.89 | 22.22 |
| HORVU3Hr1G110990.1 | Barley | peroxisome | 3.27 | 21.28 |
| HORVU5Hr1G056500.3 | Barley | extracellular | 6.06 | 21.14 |
| HORVU4Hr1G058410.1 | Barley | nucleus | 11.29 | 20.35 |
| HORVU2Hr1G101830.2 | Barley | extracellular | 5.24 | 20.13 |
Protein Annotations
| MapMan:2.4.2.1.2 | Gene3D:3.50.50.100 | UniProt:A0A287LRW5 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom |
| InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU3Hr1G076920 | EnsemblPlants:HORVU3Hr1G076920.2 |
| InterPro:IPR002048 | InterPro:IPR036188 | PFAM:PF07992 | PRINTS:PR00368 | PFscan:PS50222 | PANTHER:PTHR43706 |
| PANTHER:PTHR43706:SF3 | SUPFAM:SSF47473 | SUPFAM:SSF51905 | UniParc:UPI000B466263 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:570908294..570913236
Molecular Weight (calculated)
68674.4 Da
IEP (calculated)
9.675
GRAVY (calculated)
-0.342
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: VSLVRRRVFG SERTPLRSSP WYPHRRPAPT QIDAHAAPMS SGGASLVRRA VEAVRRTPRW QRRLVLLTVG AGTLSYACQD NRVLQISDGT GGKKKVVILG
101: TGWAGASFLR NIDTSLYDVH VVSPRNYFMF TPLLPSVTCG TVEARSIVEP IRNIVRKRGG AFRFWEAECY KIDPTSKKIH CKSGDGTNAD ANGDFVVDYD
201: YLVVTVGARP NTFNTPGVVE NCHFLKEVED AQKIRKSVMK CFERAALPNL TDEERKKNVH FVVIGGGPTG VEFAAELHDF VNEDLAKLYP DVKKYVNISV
301: IEAGDHILTM FDKRITHFAE DKFKRTGIDL KTNFKVVKVS DKTITMSNPA TGEIAVPYGL AVWSTGIGTR PMIMDFMKQV GQANRRVLAT DEWLRVQGCD
401: NVYALGDCAT ITQRKVMEDV DAIFRVADKD NSGTLTVKKI KNVLGDIYQR YPQVELYLKT NQMKGFNDLL KDKESEELNI EEFKKALAQV DSQVKMLPAT
501: AQVAAQEGAY LADCFNRLNT CEENPEGPLR IRGAGRHRFK PFRYRHLGQF APLGGEQTAA QLPGDWVHVG HSTQWLWYSV YASKQFSWRT RMLVVTDWGR
601: RFLFGRDSSS L
101: TGWAGASFLR NIDTSLYDVH VVSPRNYFMF TPLLPSVTCG TVEARSIVEP IRNIVRKRGG AFRFWEAECY KIDPTSKKIH CKSGDGTNAD ANGDFVVDYD
201: YLVVTVGARP NTFNTPGVVE NCHFLKEVED AQKIRKSVMK CFERAALPNL TDEERKKNVH FVVIGGGPTG VEFAAELHDF VNEDLAKLYP DVKKYVNISV
301: IEAGDHILTM FDKRITHFAE DKFKRTGIDL KTNFKVVKVS DKTITMSNPA TGEIAVPYGL AVWSTGIGTR PMIMDFMKQV GQANRRVLAT DEWLRVQGCD
401: NVYALGDCAT ITQRKVMEDV DAIFRVADKD NSGTLTVKKI KNVLGDIYQR YPQVELYLKT NQMKGFNDLL KDKESEELNI EEFKKALAQV DSQVKMLPAT
501: AQVAAQEGAY LADCFNRLNT CEENPEGPLR IRGAGRHRFK PFRYRHLGQF APLGGEQTAA QLPGDWVHVG HSTQWLWYSV YASKQFSWRT RMLVVTDWGR
601: RFLFGRDSSS L
001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI
Arabidopsis Description
NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.