Factsheet for HORVU4Hr1G058410.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G040130.1	Barley	peroxisome	25.07	17.03
HORVU3Hr1G087850.7	Barley	peroxisome	26.25	16.98
Solyc02g079170.2.1	Tomato	nucleus	19.76	11.47
PGSC0003DMT400057712	Potato	mitochondrion	19.76	11.47
HORVU3Hr1G076920.2	Barley	mitochondrion	20.35	11.29
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	19.17	11.09
CDY44749	Canola	mitochondrion	18.58	10.88
HORVU7Hr1G073050.3	Barley	plastid	19.47	10.77
Bra029549.1-P	Field mustard	mitochondrion	18.29	10.71
CDY16620	Canola	mitochondrion	18.29	10.71
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	18.29	10.69
AT4G05020.2	Thale cress	mitochondrion	17.99	9.85
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	5.01	6.09
HORVU7Hr1G040660.4	Barley	cytosol	2.36	4.08
HORVU2Hr1G101830.2	Barley	extracellular	1.47	3.14
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	1.47	3.09
HORVU2Hr1G022740.3	Barley	extracellular	1.18	2.92
HORVU5Hr1G020920.4	Barley	extracellular	1.47	2.86
HORVU5Hr1G056500.3	Barley	extracellular	1.47	2.86
HORVU3Hr1G110990.1	Barley	peroxisome	0.59	2.13
KRH62788	Soybean	cytosol	0.29	0.62

Protein Annotations

EnsemblPlants:HORVU4Hr1G058410.1	EnsemblPlantsGene:HORVU4Hr1G058410	Gene3D:3.50.50.100	PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	SEG:seg
UniParc:UPI000B46B257	UniProt:A0A287P7S6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:488626022..488634511

Molecular Weight (calculated)

37593.3 Da

IEP (calculated)

11.920

GRAVY (calculated)

-0.771

Length

339 amino acids

Sequence
(BLAST)

001: PVSAEPTCQC GVDKEWLWGA GARKPPRCVV VPHPRVCRPR RQVRRRRGGS SLRPEQRHQR DAREAAPRGS RGLADGVLPH RPRCGDGGHA GPGPNEPQAE
101: APRRGARLRV GAMPVPRGRG HLSLRRGVCV PEEPHGVHAA ASVDVRRHPV VPVHGGARQP HRASALHSPR IILLPRQLHR HRHAQARGVL HAGGRRRAAA
201: RQPVLLQGGL RQACDRQRRR AAHLQHQGRP RERNLPPRGE RGTTDQAQAP HQPHALREPT PVEEEKKRLL HCVVVDGGPI GVEFSGELND FIMRDVRDMY
301: AHVKDYVKVT LIEANEILSS FDVGLTGGLC THLDRWALR

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.