Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G05020.2 | Thale cress | mitochondrion | 85.52 | 80.13 |
| Solyc02g079170.2.1 | Tomato | nucleus | 76.03 | 75.51 |
| PGSC0003DMT400057712 | Potato | mitochondrion | 76.03 | 75.51 |
| KRH10751 | Soybean | mitochondrion | 72.93 | 73.44 |
| KRH21576 | Soybean | mitochondrion | 72.76 | 73.26 |
| KRH41931 | Soybean | mitochondrion | 72.93 | 72.93 |
| KRH49945 | Soybean | mitochondrion | 72.93 | 72.93 |
| TraesCS7D01G303500.1 | Wheat | golgi | 68.62 | 69.1 |
| TraesCS7B01G206900.1 | Wheat | mitochondrion | 68.45 | 68.92 |
| TraesCS7A01G306600.1 | Wheat | mitochondrion | 68.28 | 68.75 |
| KRH62788 | Soybean | cytosol | 19.14 | 68.52 |
| GSMUA_Achr4P33660_001 | Banana | mitochondrion | 67.93 | 68.05 |
| GSMUA_Achr3P22940_001 | Banana | mitochondrion | 67.07 | 67.18 |
| EES14522 | Sorghum | mitochondrion | 67.24 | 67.13 |
| AT2G20800.1 | Thale cress | mitochondrion | 66.72 | 66.49 |
| EES01568 | Sorghum | mitochondrion | 66.03 | 66.26 |
| Zm00001d012615_P001 | Maize | mitochondrion | 65.86 | 66.09 |
| Zm00001d049597_P001 | Maize | mitochondrion | 67.24 | 65.88 |
| Zm00001d043266_P002 | Maize | mitochondrion | 65.52 | 65.74 |
| TraesCS3B01G350200.1 | Wheat | mitochondrion | 64.48 | 65.61 |
| TraesCS3D01G314700.1 | Wheat | mitochondrion | 64.66 | 65.44 |
| TraesCS3A01G316500.1 | Wheat | mitochondrion | 64.48 | 65.27 |
| Os05t0331200-01 | Rice | mitochondrion | 64.66 | 65.22 |
| AT4G28220.1 | Thale cress | mitochondrion | 62.76 | 63.75 |
| Os08t0141400-01 | Rice | mitochondrion | 38.45 | 62.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 66.55 | 39.47 |
| AT1G07180.1 | Thale cress | mitochondrion | 30.52 | 34.71 |
| AT2G29990.1 | Thale cress | mitochondrion | 29.31 | 33.46 |
| Zm00001d004457_P001 | Maize | mitochondrion | 8.28 | 29.81 |
| HORVU4Hr1G058410.1 | Barley | nucleus | 10.69 | 18.29 |
Protein Annotations
| MapMan:2.4.2.1.2 | Gene3D:3.50.50.100 | EntrezGene:828234 | ProteinID:AEE84459.1 | ArrayExpress:AT4G21490 | EnsemblPlantsGene:AT4G21490 |
| RefSeq:AT4G21490 | TAIR:AT4G21490 | RefSeq:AT4G21490-TAIR-G | EnsemblPlants:AT4G21490.1 | TAIR:AT4G21490.1 | ProteinID:CAA18713.1 |
| ProteinID:CAB81256.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | UniProt:F4JJJ3 | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005758 | GO:GO:0005777 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPR002048 | InterPro:IPR036188 | Symbol:NDB3 | RefSeq:NP_193880.5 | PFAM:PF07992 | PO:PO:0000084 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0025022 | PRINTS:PR00368 |
| PFscan:PS50222 | PANTHER:PTHR43706 | PANTHER:PTHR43706:SF5 | SMART:SM00054 | SUPFAM:SSF47473 | SUPFAM:SSF51905 |
| UniParc:UPI0001A7B0FA | : | : | : | : | : |
Description
NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
Coordinates
chr4:-:11436398..11439429
Molecular Weight (calculated)
65168.1 Da
IEP (calculated)
8.501
GRAVY (calculated)
-0.329
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.