Factsheet for Os08t0141400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	45.94	71.3
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	40.62	68.08
TraesCS7A01G306600.1	Wheat	mitochondrion	88.24	54.69
TraesCS7B01G206900.1	Wheat	mitochondrion	87.96	54.51
TraesCS7D01G303500.1	Wheat	golgi	87.68	54.34
EES14522	Sorghum	mitochondrion	85.99	52.84
HORVU7Hr1G073050.3	Barley	plastid	87.96	51.22
Zm00001d049597_P001	Maize	mitochondrion	84.87	51.18
Os05t0331200-01	Rice	mitochondrion	64.71	40.17
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	64.15	39.83
PGSC0003DMT400057712	Potato	mitochondrion	64.43	39.38
Solyc02g079170.2.1	Tomato	nucleus	64.15	39.21
KRH41931	Soybean	mitochondrion	63.31	38.97
KRH49945	Soybean	mitochondrion	63.31	38.97
Bra029549.1-P	Field mustard	mitochondrion	62.75	38.69
CDY16620	Canola	mitochondrion	62.75	38.69
Os06t0684000-02	Rice	mitochondrion	63.59	38.61
CDY44749	Canola	mitochondrion	62.47	38.51
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	62.47	38.45
KRH10751	Soybean	mitochondrion	61.9	38.37
KRH21576	Soybean	mitochondrion	61.34	38.02
Solyc07g054670.2.1	Tomato	unclear	60.22	37.39
Bra006374.1-P	Field mustard	plastid	58.82	36.59
CDX78714	Canola	plastid	58.82	36.59
CDX70722	Canola	plastid	58.54	36.47
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	51.26	36.38
AT4G05020.2	Thale cress	mitochondrion	62.75	36.19
Bra023586.1-P	Field mustard	mitochondrion	57.14	36.17
AT2G20800.1	Thale cress	mitochondrion	58.54	35.91
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	57.7	35.83
CDY38082	Canola	mitochondrion	57.7	35.83
KRH25488	Soybean	peroxisome	34.73	30.32
Os01t0830100-01	Rice	mitochondrion	32.21	25.22
Os07t0564500-01	Rice	mitochondrion	36.69	23.31
KRH62788	Soybean	cytosol	2.24	4.94

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EMBL:AK072710	ProteinID:BAD11592.1	ProteinID:BAD13179.1	ProteinID:BAT03787.1
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0003955	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019646	GO:GO:0055114	InterPro:IPR036188
EnsemblPlantsGene:Os08g0141400	EnsemblPlants:Os08t0141400-01	PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3
UniProt:Q6YZ09	SUPFAM:SSF51905	UniParc:UPI000024165F	SEG:seg	:	:

Description

Similar to mRNA, clone: RTFL01-03-I20. (Os08t0141400-01)

Coordinates

chr8:-:2310032..2315261

Molecular Weight (calculated)

39582.4 Da

IEP (calculated)

7.088

GRAVY (calculated)

-0.173

Length

357 amino acids

Sequence
(BLAST)

001: MRWTAFMWEG ASRAFNHRPT FTNLVLVLGA ASSGGLVAYA DSNSDDVVGK PQGPPKKKIV VLGTGWGGTT FLRNLDSRLY DVQVISPRNY FAFTPLLPSV
101: TCGTVEPRSV VEPIRRILEK KGGDIKFWEA ECFKIDSSNK KIHCRSNIGT NLDGNGEFLV DYDYLVIAVG ARSNTFNTPG VEENCFFLKE VEDAQKIRRN
201: VMDCFERASL PYLDEEERKK NLHFVVVGGG PTGVEFAAEL HDFVTEDLSK LYPSIQHLVK ISLIEAADHI LTMFDKRITE FAEDKFGRDG IDVKTGYKVV
301: KVAKDAITMQ NPATGDIAVP YGMAVWSTGI GTRPFISEFM KQIGQVPSKK LSSTLCS

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.