Factsheet for Os01t0830100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241
peroxisome: 23257241
plastid: 23257241

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G382500.1	Wheat	mitochondrion	87.28	79.44
TraesCS3A01G349900.1	Wheat	mitochondrion	87.28	79.44
TraesCS3D01G343900.1	Wheat	mitochondrion	87.06	79.24
EES01700	Sorghum	mitochondrion	86.62	78.53
Zm00001d012464_P001	Maize	mitochondrion	87.06	75.62
VIT_19s0027g01030.t01	Wine grape	cytosol	48.68	75.0
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.6	71.43
HORVU3Hr1G087850.7	Barley	peroxisome	81.8	71.18
HORVU2Hr1G022740.3	Barley	extracellular	20.39	67.88
CDY70466	Canola	mitochondrion, peroxisome	51.54	67.14
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	70.39	64.85
Solyc06g007160.2.1	Tomato	plastid	70.18	64.65
VIT_06s0004g06760.t01	Wine grape	plastid	69.96	63.93
Bra022768.1-P	Field mustard	mitochondrion	69.74	63.1
CDX84870	Canola	mitochondrion	69.74	63.1
AT2G29990.1	Thale cress	mitochondrion	69.74	62.6
CDY15606	Canola	plastid	69.08	62.38
AT1G07180.1	Thale cress	mitochondrion	69.74	62.35
Bra030676.1-P	Field mustard	plastid	68.86	62.18
CDX86494	Canola	mitochondrion, peroxisome	68.86	62.06
CDY10256	Canola	mitochondrion	69.08	61.89
Bra015560.1-P	Field mustard	mitochondrion	68.86	61.69
CDY06685	Canola	mitochondrion	68.64	61.49
KRH17976	Soybean	cytosol	25.22	59.28
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	32.46	53.05
HORVU2Hr1G101830.2	Barley	extracellular	18.42	52.83
Os07t0564500-01	Rice	mitochondrion	63.38	51.42
HORVU7Hr1G040660.4	Barley	cytosol	21.49	50.0
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	17.54	49.38
HORVU5Hr1G020920.4	Barley	extracellular	18.2	47.43
HORVU5Hr1G056500.3	Barley	extracellular	17.54	45.71
HORVU3Hr1G110990.1	Barley	peroxisome	8.11	39.36
Os08t0141400-01	Rice	mitochondrion	25.22	32.21
Os05t0331200-01	Rice	mitochondrion	33.77	26.78
Os06t0684000-02	Rice	mitochondrion	33.55	26.02

Protein Annotations

MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:AK069755	ProteinID:BAD73631.1	ProteinID:BAD81843.1	ProteinID:BAF06608.1
ProteinID:BAS75048.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	EnsemblPlantsGene:Os01g0830100	EnsemblPlants:Os01t0830100-01
PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	UniProt:Q5QLT6	SUPFAM:SSF51905
UniParc:UPI000048E014	SEG:seg	:	:	:	:

Description

Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein. (Os01t0830100-01);Similar to ATNDI1/NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase. (Os01t0830100-02)

Coordinates

chr1:+:35508869..35512813

Molecular Weight (calculated)

49511.8 Da

IEP (calculated)

8.716

GRAVY (calculated)

-0.030

Length

456 amino acids

Sequence
(BLAST)

001: MAASSLLRSL SRISRRGCVG GAGPSPFHHS RLPYSPFSTA AADAVERRGF AGLGPTAKGE KARVVVLGTG WAGSRLMKDI DTTGYEVVCV SPRNHMVFTP
101: LLASTCVGTL EFRSVAEPLA RIQPAVSKSP GSYFLLARCT AVDPDAHTID CETVTEGEKD TLKPWKFKVA YDKLVFACGA EASTFGIRGV TDHAIFLREV
201: HHAQEIRRKL LLNLMLSDVP GISEEEKRRL LHCVVVGGGP TGVEFSGELS DFIIRDVKQR YSHVKDYIHV TLIEANEILS SFDVRLRQYA TNQLTKSGVR
301: LVRGIVKDVQ PNKLILDNGE EVPYGLLVWS TGVGPSSFVK SLPFPKSPGG RIGVDEWLRV PSARDVFAIG DCSGFLESTG KDVLPALAQV AERQGKYLAH
401: LLNHVMKAGG GHANCEIDVD LGPAFVYKHL GSMATVGRYK ALVDLRQSKA GYCFCL

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.