CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06685	Canola	mitochondrion	97.25	97.25
AT1G07180.1	Thale cress	mitochondrion	91.75	91.57
CDY15606	Canola	plastid	90.57	91.29
CDX86494	Canola	mitochondrion, peroxisome	90.18	90.71
CDY70466	Canola	mitochondrion, peroxisome	60.31	87.71
CDX84870	Canola	mitochondrion	84.68	85.52
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	62.48	78.33
VIT_19s0027g01030.t01	Wine grape	cytosol	43.42	74.66
HORVU3Hr1G110990.1	Barley	peroxisome	13.75	74.47
KRH17048	Soybean	mitochondrion	70.53	74.02
KRH72693	Soybean	mitochondrion	70.33	73.81
Solyc06g007160.2.1	Tomato	plastid	69.94	71.92
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	69.94	71.92
VIT_06s0004g06760.t01	Wine grape	plastid	70.33	71.74
KRG98274	Soybean	mitochondrion	71.12	71.54
KRH30292	Soybean	mitochondrion	71.51	71.51
EES01700	Sorghum	mitochondrion	70.33	71.17
TraesCS3B01G382500.1	Wheat	mitochondrion	68.96	70.06
TraesCS3D01G343900.1	Wheat	mitochondrion	68.76	69.86
TraesCS3A01G349900.1	Wheat	mitochondrion	68.57	69.66
Os01t0830100-01	Rice	mitochondrion	61.89	69.08
Zm00001d012464_P001	Maize	mitochondrion	69.55	67.43
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	21.22	66.67
HORVU3Hr1G087850.7	Barley	peroxisome	67.78	65.84
HORVU2Hr1G022740.3	Barley	extracellular	17.09	63.5
HORVU2Hr1G101830.2	Barley	extracellular	18.86	60.38
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	32.02	58.42
HORVU7Hr1G040660.4	Barley	cytosol	22.0	57.14
HORVU5Hr1G020920.4	Barley	extracellular	19.25	56.0
HORVU5Hr1G056500.3	Barley	extracellular	18.66	54.29
CDY58724	Canola	mitochondrion	33.79	30.18
CDY44749	Canola	mitochondrion	34.18	30.05
CDY16620	Canola	mitochondrion	34.18	30.05
CDY29891	Canola	mitochondrion	33.6	30.0
CDY38082	Canola	mitochondrion	33.6	29.74
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	33.6	29.74
CDX70722	Canola	plastid	33.2	29.49
CDX78714	Canola	plastid	33.2	29.44

Protein Annotations

EnsemblPlants:CDY10256	EnsemblPlantsGene:GSBRNA2T00032082001	Gene3D:3.50.50.100	GO:A0A078FA48	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	PFAM:PF07992	PRINTS:PR00368	ProteinID:CDY10256
ProteinID:CDY10256.1	SUPFAM:SSF51905	UniParc:UPI0004EF3C06	UniProt:A0A078FA48	MapMan:2.4.2.1.1	:

Description

BnaC05g04990DBnaC05g04990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA48]

Coordinates

chrLK032001:+:795348..797718

Molecular Weight (calculated)

56518.0 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.139

Length

509 amino acids

Sequence
(BLAST)

001: MLWIKNLARI SPTTSSVGNL FRNSESYTLS SRFCTALQQS ETVQATDQVD NGLEQQEQRY HGLAPTKEGE KPRVLVLGSG WAGCRLMKGI DTSIYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSYYFLANCS RLDSENHEVH CETVTDGLST TLEPWKFKIA YDKLVLACGA EASTFGINGV
201: LENAIFLREV HHAQEIRRKL LLNLMLSEVP GIGEEEKRRL LHCVVVGGGP TGVEFSGELS DFIMKDVRER YAHVKDDIRV TLIEARDILS SFDDGLRQYA
301: IKQLNKSGVK LVRGIVKEVK PQKLVLDDGT DVPYGLLVWS TGVGPSSFVK SLDLPKDPGG RIGIDEWMRV PSVQDVFAIG DCSGYLESTG KSTLPALAQV
401: AEREGKYMAN LLNVMGKAGG GRAWNAKEAE LGEPFVYKHL GSMATIGRYK ALVDLRESKE GKGISMAGFV SWFIWRSAYL TRVLSWRNRF YVAINWLTTF
501: VFGRDISRI

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.