CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029549.1-P	Field mustard	mitochondrion	98.96	98.96
CDY16620	Canola	mitochondrion	98.96	98.96
AT4G05020.2	Thale cress	mitochondrion	93.61	87.56
PGSC0003DMT400057712	Potato	mitochondrion	75.82	75.17
Solyc02g079170.2.1	Tomato	nucleus	75.82	75.17
KRH49945	Soybean	mitochondrion	73.92	73.79
KRH21576	Soybean	mitochondrion	73.06	73.44
KRH41931	Soybean	mitochondrion	73.4	73.28
KRH10751	Soybean	mitochondrion	72.71	73.09
TraesCS7B01G206900.1	Wheat	mitochondrion	69.08	69.44
TraesCS7D01G303500.1	Wheat	golgi	69.08	69.44
TraesCS7A01G306600.1	Wheat	mitochondrion	68.91	69.27
GSMUA_Achr4P33660_001	Banana	mitochondrion	68.74	68.74
CDX78714	Canola	plastid	68.05	68.64
CDX70722	Canola	plastid	67.53	68.24
CDY38082	Canola	mitochondrion	67.7	68.17
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	67.53	68.0
KRH62788	Soybean	cytosol	19.0	67.9
EES14522	Sorghum	mitochondrion	68.05	67.81
GSMUA_Achr3P22940_001	Banana	mitochondrion	66.84	66.84
Zm00001d049597_P001	Maize	mitochondrion	68.22	66.72
EES01568	Sorghum	mitochondrion	65.63	65.74
Zm00001d012615_P001	Maize	mitochondrion	65.63	65.74
TraesCS3B01G350200.1	Wheat	mitochondrion	64.59	65.61
Zm00001d043266_P002	Maize	mitochondrion	65.28	65.4
TraesCS3D01G314700.1	Wheat	mitochondrion	64.59	65.27
TraesCS3A01G316500.1	Wheat	mitochondrion	64.42	65.1
Os05t0331200-01	Rice	mitochondrion	63.56	64.0
CDY58724	Canola	mitochondrion	62.52	63.51
CDY29891	Canola	mitochondrion	62.52	63.51
Os08t0141400-01	Rice	mitochondrion	38.51	62.47
GSMUA_Achr10P...	Banana	mitochondrion	66.67	39.47
CDY70466	Canola	mitochondrion, peroxisome	22.11	36.57
CDY15606	Canola	plastid	30.05	34.46
CDX86494	Canola	mitochondrion, peroxisome	30.05	34.39
CDY06685	Canola	mitochondrion	30.22	34.38
CDY10256	Canola	mitochondrion	30.05	34.18
CDX84870	Canola	mitochondrion	29.53	33.93
Zm00001d004457_P001	Maize	mitochondrion	8.12	29.19
HORVU4Hr1G058410.1	Barley	nucleus	10.88	18.58

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	GO:A0A078I5K2	UniProt:A0A078I5K2	EnsemblPlants:CDY44749	ProteinID:CDY44749
ProteinID:CDY44749.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00080737001	InterPro:IPR002048	InterPro:IPR036188
PFAM:PF00036	PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706
PANTHER:PTHR43706:SF5	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI0004EC648F	SEG:seg

Description

BnaC09g22310DBnaC09g22310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5K2]

Coordinates

chrLK032600:+:151871..155857

Molecular Weight (calculated)

64916.5 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.335

Length

579 amino acids

Sequence
(BLAST)

001: MRRSFSFFER FSKAFQDYPS LSRIIVVSTI SGGGLIAYSE ANGTNAVVET GTRKKKVVLL GTGWAGTSFL KNLNNSQYEV QIISPRNYFA FTPLLPSVTC
101: GTVEARSVVE PIRNIGRKKN VDTSYLEAEC FKIDPASKKV FCRSKQGVSS GKKEEFSVDY DYLVIATGAQ SNTFNIPGVE ENCHFLKEVE DAQGIRKKVI
201: DSFEKASLPE LSEEERKRIL HFVVVGGGPT GVEFAAELHD FVREDLVTLY PKAKDLVRIT LLEAADHILT MFDKRITEFA EEKFSRDGID VKLGSMVTKV
301: NEKDISAKTK GGGVSSIPYG MIVWSTGIGT RPVIKDFMKQ IGQGNRRALA TDEWLRVEGC DNIYALGDCA TINQRKVMED VSAIFSKADK DNSGTLTLKE
401: FQEAMDDICV RYPQVELYLK SKRMRGIADL LKEAEADDGS KKNVELKIEE FKSALSQVDS EVKFLPATAQ VAAQQGTYLA KCFDRMEECE KNPEGPIRMR
501: GEGRHRFRPF RYRHLGSFAP LGGEQTAAEL PGDWVSIGHS SQWLWYSVYA SKQVSWRTRV LVVSDWMRRF IFGRDSSSI

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.