CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049597_P001	Maize	mitochondrion	97.42	95.61
TraesCS7D01G303500.1	Wheat	golgi	87.09	87.85
TraesCS7B01G206900.1	Wheat	mitochondrion	87.09	87.85
TraesCS7A01G306600.1	Wheat	mitochondrion	86.92	87.67
Os08t0141400-01	Rice	mitochondrion	52.84	85.99
HORVU7Hr1G073050.3	Barley	plastid	87.26	82.71
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	28.4	71.74
EES01568	Sorghum	mitochondrion	70.4	70.76
KRH49945	Soybean	mitochondrion	69.19	69.31
KRH10751	Soybean	mitochondrion	68.67	69.27
KRH41931	Soybean	mitochondrion	68.85	68.97
KRH25488	Soybean	peroxisome	48.54	68.95
KRH21576	Soybean	mitochondrion	68.16	68.75
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	25.13	68.54
PGSC0003DMT400057712	Potato	mitochondrion	68.85	68.49
CDY16620	Canola	mitochondrion	68.16	68.39
Bra029549.1-P	Field mustard	mitochondrion	68.16	68.39
Solyc02g079170.2.1	Tomato	nucleus	68.67	68.32
CDY44749	Canola	mitochondrion	67.81	68.05
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.3	68.0
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	67.13	67.24
EER90248	Sorghum	mitochondrion	67.47	67.12
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.49	66.4
CDX78714	Canola	plastid	63.86	64.63
Bra006374.1-P	Field mustard	plastid	63.68	64.46
CDX70722	Canola	plastid	63.51	64.4
Bra023586.1-P	Field mustard	mitochondrion	62.13	64.01
CDY38082	Canola	mitochondrion	63.34	64.0
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	63.34	64.0
AT4G05020.2	Thale cress	mitochondrion	68.16	63.97
Solyc07g054670.2.1	Tomato	unclear	63.17	63.83
AT2G20800.1	Thale cress	mitochondrion	63.51	63.4
KRH62788	Soybean	cytosol	17.56	62.96
EES01700	Sorghum	mitochondrion	30.81	35.59
EER97387	Sorghum	mitochondrion	30.12	30.92

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EntrezGene:8067815	UniProt:C5YN29	EnsemblPlants:EES14522	ProteinID:EES14522
ProteinID:EES14522.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0003955	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019646	GO:GO:0055114	InterPro:IPR002048
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706
PANTHER:PTHR43706:SF3	SMART:SM00054	EnsemblPlantsGene:SORBI_3007G035700	SUPFAM:SSF47473	SUPFAM:SSF51905	unigene:Sbi.3550
UniParc:UPI0001A87AFA	RefSeq:XP_002445027.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:3217012..3222717

Molecular Weight (calculated)

65136.9 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.289

Length

581 amino acids

Sequence
(BLAST)

001: MRWAAFLWEG ASRASGGRRP GVSNLLLVVA AASSGGLVAY ADSGSDAAVE KPQLPPRKKV VVLGTGWGGT TFLRNLDSRL YDVQVISPRN YFAFTPLLPS
101: VTSGTVEPRS IVEPIRRILE KKGGEIKFWE AECFKIDPQS KKIHCRSNVG TNLEGNGEFS VDYDYLVVAV GARTNTFNTP GVVENCHFLK EVEDAQKIRR
201: SVMDCFERAS LPFLNEEERK KNLHFVVVGG GPTGVEFAAS LHDFVTEDLS KLYPSVQHLV KISLIEAADH ILTMFDKRIT NFAEDKFGRD GIDVKTGYKV
301: VKVSKDDITM QNPATGDISV PYGMAVWSTG IGTRPFVVEF MKQIGQANRR VLATDEWLRV RECDGVYAIG DCATINQRKV MEDISEIFRV ADKDKSGTLT
401: VKEIQDILDD IYVRYPQVQL YLKSKQMNGI ADLVRSAKGD AEKESMELNI EEFKKALALV DSQVKFLPAT AQVASQQGQY LARCFNKMKD AEENPEGPIR
501: IRGEGRHRFR PFRYRHLGQF APLGGEQTAA QLPGDWISIG HSTQWLWYSV YATKQISWRT RMLVVSDWTR RFIFGRDSSC I

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.