Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029549.1-P | Field mustard | mitochondrion | 88.53 | 94.65 |
| CDY16620 | Canola | mitochondrion | 88.53 | 94.65 |
| CDY44749 | Canola | mitochondrion | 87.56 | 93.61 |
| AT4G21490.1 | Thale cress | cytosol, mitochondrion, peroxisome | 80.13 | 85.52 |
| PGSC0003DMT400057712 | Potato | mitochondrion | 71.57 | 75.86 |
| Solyc02g079170.2.1 | Tomato | nucleus | 71.57 | 75.86 |
| KRH49945 | Soybean | mitochondrion | 69.95 | 74.66 |
| KRH41931 | Soybean | mitochondrion | 69.31 | 73.97 |
| KRH10751 | Soybean | mitochondrion | 68.5 | 73.61 |
| KRH21576 | Soybean | mitochondrion | 68.5 | 73.61 |
| TraesCS7B01G206900.1 | Wheat | mitochondrion | 65.11 | 69.97 |
| TraesCS7D01G303500.1 | Wheat | golgi | 65.11 | 69.97 |
| TraesCS7A01G306600.1 | Wheat | mitochondrion | 64.94 | 69.79 |
| EES14522 | Sorghum | mitochondrion | 63.97 | 68.16 |
| GSMUA_Achr4P33660_001 | Banana | mitochondrion | 63.65 | 68.05 |
| KRH62788 | Soybean | cytosol | 17.61 | 67.28 |
| Zm00001d049597_P001 | Maize | mitochondrion | 64.14 | 67.06 |
| GSMUA_Achr3P22940_001 | Banana | mitochondrion | 62.68 | 67.01 |
| TraesCS3B01G350200.1 | Wheat | mitochondrion | 61.07 | 66.32 |
| EES01568 | Sorghum | mitochondrion | 61.87 | 66.26 |
| Zm00001d012615_P001 | Maize | mitochondrion | 61.87 | 66.26 |
| TraesCS3D01G314700.1 | Wheat | mitochondrion | 61.07 | 65.97 |
| Zm00001d043266_P002 | Maize | mitochondrion | 61.55 | 65.92 |
| TraesCS3A01G316500.1 | Wheat | mitochondrion | 60.9 | 65.79 |
| AT2G20800.1 | Thale cress | mitochondrion | 61.71 | 65.64 |
| Os05t0331200-01 | Rice | mitochondrion | 59.94 | 64.52 |
| AT4G28220.1 | Thale cress | mitochondrion | 58.48 | 63.4 |
| Os08t0141400-01 | Rice | mitochondrion | 36.19 | 62.75 |
| GSMUA_Achr10P... | Banana | mitochondrion | 61.71 | 39.06 |
| AT1G07180.1 | Thale cress | mitochondrion | 28.59 | 34.71 |
| AT2G29990.1 | Thale cress | mitochondrion | 27.46 | 33.46 |
| Zm00001d004457_P001 | Maize | mitochondrion | 7.92 | 30.43 |
| HORVU4Hr1G058410.1 | Barley | nucleus | 9.85 | 17.99 |
Protein Annotations
| MapMan:2.4.2.1.2 | Gene3D:3.50.50.100 | EntrezGene:825844 | ProteinID:AEE82461.1 | ArrayExpress:AT4G05020 | EnsemblPlantsGene:AT4G05020 |
| RefSeq:AT4G05020 | TAIR:AT4G05020 | RefSeq:AT4G05020-TAIR-G | EnsemblPlants:AT4G05020.2 | TAIR:AT4G05020.2 | Unigene:At.4059 |
| ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | UniProt:F4JGL5 | InterPro:FAD/NAD-bd_sf |
| InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016491 | GO:GO:0031314 | GO:GO:0055114 | InterPro:IPR002048 | InterPro:IPR036188 |
| Symbol:NDB2 | RefSeq:NP_001190678.1 | PFAM:PF00036 | PFAM:PF07992 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00368 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR43706 | PANTHER:PTHR43706:SF5 | SMART:SM00054 | SUPFAM:SSF47473 | SUPFAM:SSF51905 | UniParc:UPI0001E92F56 |
| SEG:seg | : | : | : | : | : |
Description
NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
Coordinates
chr4:+:2572621..2576595
Molecular Weight (calculated)
69246.8 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.323
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRIWKLRG ISKTLSQDTT ESCALDHKGV GKMELIPYII RYRHLGQFAP LGGEQTAAQL PGDWVSIGHS SQWLWYSVYA SKQVSWRTRV
601: LVVSDWMRRF IFGRDSSSI
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRIWKLRG ISKTLSQDTT ESCALDHKGV GKMELIPYII RYRHLGQFAP LGGEQTAAQL PGDWVSIGHS SQWLWYSVYA SKQVSWRTRV
601: LVVSDWMRRF IFGRDSSSI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.