Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- peroxisome 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58724 | Canola | mitochondrion | 89.49 | 89.65 |
| CDY29891 | Canola | mitochondrion | 89.32 | 89.47 |
| Bra024217.1-P | Field mustard | mitochondrion | 89.14 | 89.3 |
| KRH25490 | Soybean | mitochondrion | 69.88 | 69.63 |
| PGSC0003DMT400047210 | Potato | cytosol | 37.48 | 69.48 |
| PGSC0003DMT400055796 | Potato | mitochondrion | 70.05 | 69.32 |
| Solyc10g008630.2.1 | Tomato | mitochondrion | 69.7 | 68.98 |
| VIT_12s0057g00260.t01 | Wine grape | mitochondrion, plasma membrane | 69.53 | 68.8 |
| Solyc07g054640.1.1 | Tomato | mitochondrion | 68.13 | 67.65 |
| AT4G21490.1 | Thale cress | cytosol, mitochondrion, peroxisome | 63.75 | 62.76 |
| AT2G20800.1 | Thale cress | mitochondrion | 60.95 | 59.79 |
| AT4G05020.2 | Thale cress | mitochondrion | 63.4 | 58.48 |
| KRH56037 | Soybean | extracellular, plasma membrane | 32.22 | 54.6 |
| KRH26903 | Soybean | mitochondrion | 21.54 | 52.12 |
| AT1G07180.1 | Thale cress | mitochondrion | 30.65 | 34.31 |
| AT2G29990.1 | Thale cress | mitochondrion | 29.6 | 33.27 |
Protein Annotations
| MapMan:2.4.2.1.2 | Gene3D:3.50.50.100 | EntrezGene:828937 | UniProt:A0A178UX29 | ProteinID:AEE85455.1 | ArrayExpress:AT4G28220 |
| EnsemblPlantsGene:AT4G28220 | RefSeq:AT4G28220 | TAIR:AT4G28220 | RefSeq:AT4G28220-TAIR-G | EnsemblPlants:AT4G28220.1 | TAIR:AT4G28220.1 |
| EMBL:AY086046 | EMBL:BT025339 | ProteinID:CAB79624.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 |
| GO:GO:0005758 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0031314 | GO:GO:0055114 | InterPro:IPR002048 | InterPro:IPR036188 | Symbol:NDB1 | RefSeq:NP_567801.1 |
| ProteinID:OAO98448.1 | PFAM:PF07992 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00368 | PRINTS:PR00469 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR43706 | PANTHER:PTHR43706:SF3 | InterPro:Pyridine_nuc-diS_OxRdtase_2 | UniProt:Q1JPL4 |
| SUPFAM:SSF47473 | SUPFAM:SSF51905 | SignalP:SignalP-noTM | UniParc:UPI0000162B3B | SEG:seg | : |
Description
NDB1External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]
Coordinates
chr4:+:13992210..13995831
Molecular Weight (calculated)
63317.6 Da
IEP (calculated)
6.703
GRAVY (calculated)
-0.218
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.