Factsheet for TraesCS3D01G314700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G350200.1	Wheat	mitochondrion	98.6	99.12
TraesCS3A01G316500.1	Wheat	mitochondrion	98.6	98.6
HORVU3Hr1G076920.2	Barley	mitochondrion	96.16	90.18
Os05t0331200-01	Rice	mitochondrion	88.13	87.83
Zm00001d043266_P002	Maize	mitochondrion	87.61	86.85
Zm00001d012615_P001	Maize	mitochondrion	87.26	86.51
EES01568	Sorghum	mitochondrion	87.26	86.51
GSMUA_Achr4P33660_001	Banana	mitochondrion	73.3	72.54
TraesCS7D01G303500.1	Wheat	golgi	70.86	70.49
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	27.92	69.57
KRH25488	Soybean	peroxisome	47.82	66.99
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.19	66.96
KRH21576	Soybean	mitochondrion	65.62	65.28
KRH41931	Soybean	mitochondrion	65.79	65.0
CDY16620	Canola	mitochondrion	65.62	64.94
Bra029549.1-P	Field mustard	mitochondrion	65.62	64.94
KRH10751	Soybean	mitochondrion	65.27	64.93
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	56.89	64.81
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.08	64.79
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	65.44	64.66
KRH49945	Soybean	mitochondrion	65.44	64.66
CDY44749	Canola	mitochondrion	65.27	64.59
PGSC0003DMT400057712	Potato	mitochondrion	65.79	64.55
Solyc02g079170.2.1	Tomato	nucleus	65.62	64.38
Solyc07g054670.2.1	Tomato	unclear	64.4	64.17
Bra023586.1-P	Field mustard	mitochondrion	61.78	62.77
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.83	62.61
CDY38082	Canola	mitochondrion	62.83	62.61
CDX78714	Canola	plastid	62.48	62.37
Bra006374.1-P	Field mustard	plastid	62.3	62.2
CDX70722	Canola	plastid	62.13	62.13
AT2G20800.1	Thale cress	mitochondrion	62.65	61.68
AT4G05020.2	Thale cress	mitochondrion	65.97	61.07
KRH62788	Soybean	cytosol	17.1	60.49
TraesCS7D01G438100.1	Wheat	peroxisome, plastid	64.05	59.19
TraesCS3D01G343900.1	Wheat	mitochondrion	28.27	32.34
TraesCS2D01G212500.1	Wheat	plastid	30.54	31.25

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SUPFAM:SSF47473	SUPFAM:SSF51905
EnsemblPlantsGene:TraesCS3D01G314700	EnsemblPlants:TraesCS3D01G314700.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:428512836..428517260

Molecular Weight (calculated)

64331.1 Da

IEP (calculated)

8.983

GRAVY (calculated)

-0.312

Length

573 amino acids

Sequence
(BLAST)

001: MSTGGASLVR RALEAVRRTP RWQERLVVLT VGAGTLSYAC QDNRVLQISD GTGGKKKVVI LGTGWAGASF LRNIDTSLYD VHVVSPRNYF MFTPLLPSVT
101: CGTVEARSIV EPIRNIVRKR GGAFRFWEAE CYKIDPTSKK VHCKSGDGTN ADANGEFVVD YDYLIVTVGA KPNTFNTPGV AENCHFLKEV EDAQKIRKSV
201: MKCFERAALP NLTDEERKKN VHFVVIGGGP TGVEFAAELH DFVNEDLAKL YPDVKKYVNI SVIEAGEHIL TMFDKRITHF AEDKFKRTGI DLKTNFKVVK
301: VSDKTITMSN PTTGEIAVPY GLAVWSTGIG TRPIIMDFMK QVGQGNRRVL ATDEWLRVLG CDNVYALGDC ATISQRKVME DVDSIFRVAD KDNSGTLSVK
401: NIKNVLGDIY QRYPQVELYL KTNQMKGFHD LLKDKETEEL NIEEFKKALA QVDSQVKMLP ATAQVAAQEG AYLADCFNRM NTCEENPEGP LRIRGAGRHR
501: FKPFRYRHLG QFAPLGGEQT AAQLPGDWVH VGHSTQWLWY SVYASKQFSW RTRMLVVTDW GRRFFFGRDS SSL

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.