CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G110990.1	Barley	peroxisome	20.0	74.47
Bra022768.1-P	Field mustard	mitochondrion	99.43	69.05
CDX84870	Canola	mitochondrion	99.43	69.05
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	79.71	68.72
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	30.29	65.43
AT2G29990.1	Thale cress	mitochondrion	94.57	65.16
HORVU2Hr1G022740.3	Barley	extracellular	24.29	62.04
CDY15606	Canola	plastid	87.43	60.59
CDY10256	Canola	mitochondrion	87.71	60.31
CDX86494	Canola	mitochondrion, peroxisome	87.14	60.28
CDY06685	Canola	mitochondrion	87.43	60.12
HORVU2Hr1G101830.2	Barley	extracellular	26.86	59.12
HORVU5Hr1G020920.4	Barley	extracellular	28.29	56.57
KRH17048	Soybean	mitochondrion	78.0	56.29
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	44.86	56.27
HORVU7Hr1G040660.4	Barley	cytosol	31.43	56.12
KRH72693	Soybean	mitochondrion	77.14	55.67
EES01700	Sorghum	mitochondrion	79.43	55.27
KRH30292	Soybean	mitochondrion	80.0	55.01
KRG98274	Soybean	mitochondrion	79.14	54.74
VIT_19s0027g01030.t01	Wine grape	cytosol	46.29	54.73
Solyc06g007160.2.1	Tomato	plastid	77.14	54.55
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	76.86	54.34
HORVU5Hr1G056500.3	Barley	extracellular	27.14	54.29
TraesCS3A01G349900.1	Wheat	mitochondrion	77.43	54.09
TraesCS3B01G382500.1	Wheat	mitochondrion	77.43	54.09
TraesCS3D01G343900.1	Wheat	mitochondrion	77.14	53.89
VIT_06s0004g06760.t01	Wine grape	plastid	76.57	53.71
Zm00001d012464_P001	Maize	mitochondrion	78.57	52.38
Os01t0830100-01	Rice	mitochondrion	67.14	51.54
HORVU3Hr1G087850.7	Barley	peroxisome	77.14	51.53
CDY58724	Canola	mitochondrion	36.86	22.63
CDY29891	Canola	mitochondrion	36.57	22.46
CDY44749	Canola	mitochondrion	36.57	22.11
CDY16620	Canola	mitochondrion	36.57	22.11
CDY38082	Canola	mitochondrion	36.0	21.91
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	36.0	21.91
CDX70722	Canola	plastid	35.71	21.82
CDX78714	Canola	plastid	35.71	21.78

Protein Annotations

EnsemblPlants:CDY70466	EnsemblPlantsGene:GSBRNA2T00003673001	Gene3D:3.50.50.100	GO:A0A078JYC0	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	PFAM:PF07992	PRINTS:PR00368	ProteinID:CDY70466
ProteinID:CDY70466.1	SUPFAM:SSF51905	UniParc:UPI0004EE1579	UniProt:A0A078JYC0	MapMan:2.4.2.1.1	:

Description

BnaCnng68490DBnaCnng68490D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYC0]

Coordinates

chrLK042204:-:485..2631

Molecular Weight (calculated)

38922.2 Da

IEP (calculated)

9.671

GRAVY (calculated)

-0.045

Length

350 amino acids

Sequence
(BLAST)

001: VHCETLTDGL NTLKPWKFKI AYDKLVVACG AEASTFGIQG VLENAIFLRE VHHAQEIRRK LLLNLMLSDT PGISNEEKQR LLHCVVVGGG PTGVEFSGEL
101: SDFIMKDVRQ RYAHVKDDVH VTLIEAKDIL SSFDDRLRRY AIKQLNKSGV RFVRGIVKDV KPQKLILDDG TEVPYGLLVW STGVGPSPFV SSLDLAKAPG
201: GRIGIDQWMR VPSVQDVFAI GDCSGYLETT GKPTLPALAQ VAEREGKYLA NLLNEIGKAN GGRANSAKEI ALGVPFVYKH LGSMATIGRY KALVDLRESK
301: DAKGISMTGF VSWFIWRSAY LTRVISWRNR FYVAINWFTT FVFGRDISRI

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.