CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98274	Soybean	mitochondrion	97.25	97.83
KRH72693	Soybean	mitochondrion	76.42	80.21
KRH17048	Soybean	mitochondrion	76.42	80.21
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.85	80.05
CDY70466	Canola	mitochondrion, peroxisome	55.01	80.0
Solyc06g007160.2.1	Tomato	plastid	73.28	75.35
VIT_19s0027g01030.t01	Wine grape	cytosol	43.61	75.0
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	72.89	74.95
VIT_06s0004g06760.t01	Wine grape	plastid	73.08	74.55
Bra022768.1-P	Field mustard	mitochondrion	73.28	74.01
CDX84870	Canola	mitochondrion	73.28	74.01
AT2G29990.1	Thale cress	mitochondrion	72.89	73.03
Bra030676.1-P	Field mustard	plastid	72.3	72.87
CDY15606	Canola	plastid	72.1	72.67
CDX86494	Canola	mitochondrion, peroxisome	71.91	72.33
AT1G07180.1	Thale cress	mitochondrion	72.3	72.16
CDY10256	Canola	mitochondrion	71.51	71.51
Bra015560.1-P	Field mustard	mitochondrion	70.92	70.92
CDY06685	Canola	mitochondrion	70.53	70.53
KRH49960	Soybean	mitochondrion	65.23	60.36
KRH41912	Soybean	mitochondrion	65.03	60.18
KRH17976	Soybean	cytosol	22.4	58.76
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	30.26	30.62
KRH26903	Soybean	mitochondrion	14.15	30.51
KRH25490	Soybean	mitochondrion	34.18	30.37
KRH21576	Soybean	mitochondrion	33.79	29.86
KRH41931	Soybean	mitochondrion	33.99	29.83
KRH49945	Soybean	mitochondrion	33.79	29.66
KRH22445	Soybean	peroxisome	2.95	29.41
KRH10751	Soybean	mitochondrion	33.2	29.34
KRH25488	Soybean	peroxisome	22.59	28.12
KRH56037	Soybean	extracellular, plasma membrane	13.75	20.77
KRH62788	Soybean	cytosol	4.91	15.43

Protein Annotations

EntrezGene:100793544	MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:ACUP02006949	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
EnsemblPlantsGene:GLYMA_11G173700	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:I1LLL3	InterPro:IPR036188	EnsemblPlants:KRH30292	ProteinID:KRH30292	ProteinID:KRH30292.1
PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	SUPFAM:SSF51905	UniParc:UPI000233C9BB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:18899991..18904561

Molecular Weight (calculated)

56815.8 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.096

Length

509 amino acids

Sequence
(BLAST)

001: MAWLRNLSKF ATMKRASSSS SQRPKNTDPF CLLPSFTFFS NFSTNTIEEK PCVKPVEYNN YSGLQPTRPH EKPRVVVLGS GWAGCRLMKG LDPRVYDIVC
101: VSPRNHMVFT PLLASTCVGT LEFRSVAEPI GRIQPAISRE PGSYFFLANC TQIDAHNHMV HCETVTEGVE TIAPWKFTIS YDKLVIALGS QPSTFGIQGV
201: KEHAIFLREV HHAQEIRRKL LLNLMLSDVP GISEEEKQRL LHCVVVGGGP TGVEFSGELS DFITKDVRQR YVHVKDYIRV TLIEANEILS SFDDRLRRYA
301: TKQLTKSGVR LVRGIVKDVK PQKISLNDGS EVPYGLLVWS TGVGPLPMIQ SLDLPKAPGG RIGVDEWLRV PSVQDVFSIG DCSGFVESTG RQTLPALAQV
401: AERQGKYLAA LLNKIGKAGA GHANSAKEIE FGDPFVYRHL GSMATIGRYK ALVDLRQTKE AKGLALAGFL SFFIWRSAYI TRVISWRNRF YVFVNWITTV
501: VFGRDISRL

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.