CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30292	Soybean	mitochondrion	97.83	97.25
KRH72693	Soybean	mitochondrion	77.67	81.03
KRH17048	Soybean	mitochondrion	77.67	81.03
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.83	79.56
CDY70466	Canola	mitochondrion, peroxisome	54.74	79.14
VIT_06s0004g06760.t01	Wine grape	plastid	74.11	75.15
VIT_19s0027g01030.t01	Wine grape	cytosol	43.87	75.0
Solyc06g007160.2.1	Tomato	plastid	73.32	74.95
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	72.73	74.34
Bra022768.1-P	Field mustard	mitochondrion	73.12	73.41
CDX84870	Canola	mitochondrion	73.12	73.41
AT2G29990.1	Thale cress	mitochondrion	72.73	72.44
Bra030676.1-P	Field mustard	plastid	72.13	72.28
CDX86494	Canola	mitochondrion, peroxisome	72.13	72.13
CDY15606	Canola	plastid	71.94	72.08
AT1G07180.1	Thale cress	mitochondrion	72.13	71.57
CDY10256	Canola	mitochondrion	71.54	71.12
Bra015560.1-P	Field mustard	mitochondrion	70.95	70.53
CDY06685	Canola	mitochondrion	70.55	70.14
KRH49960	Soybean	mitochondrion	66.01	60.73
KRH41912	Soybean	mitochondrion	65.42	60.18
KRH17976	Soybean	cytosol	22.53	58.76
KRH26903	Soybean	mitochondrion	14.43	30.93
KRH25490	Soybean	mitochondrion	34.78	30.72
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	30.43	30.62
KRH21576	Soybean	mitochondrion	33.79	29.69
KRH41931	Soybean	mitochondrion	33.99	29.66
KRH49945	Soybean	mitochondrion	33.79	29.48
KRH22445	Soybean	peroxisome	2.96	29.41
KRH10751	Soybean	mitochondrion	33.2	29.17
KRH25488	Soybean	peroxisome	22.73	28.12
KRH56037	Soybean	extracellular, plasma membrane	13.83	20.77
KRH62788	Soybean	cytosol	4.94	15.43

Protein Annotations

EntrezGene:100780933	MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:ACUP02010861	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
EnsemblPlantsGene:GLYMA_18G061700	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:I1MZY7	InterPro:IPR036188	EnsemblPlants:KRG98274	ProteinID:KRG98274	ProteinID:KRG98274.1
PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	SUPFAM:SSF51905	UniParc:UPI000233EE01

Description

hypothetical protein

Coordinates

chr18:+:5602218..5606404

Molecular Weight (calculated)

56485.3 Da

IEP (calculated)

9.490

GRAVY (calculated)

-0.079

Length

506 amino acids

Sequence
(BLAST)

001: MAWLRNLSKF ATKRASSSQR PKNTDPFCLL PSFTFLSHFS STNTIEEKPC VEPVEYNYSG LEPTRPHEKP RVVVLGSGWA GCRLMKGLDP RVYDIVCVSP
101: RNHMVFTPLL ASTCVGTLEF RSVAEPIGRI QPAISREPGS YFFLANCTQI DAHNHMVHCE TVTEGVETIA PWKFTISYDK LVIALGSQPS TFGIQGVKEH
201: AIFLREVHHA QEIRRKLLLN LMLSDVPGIS EEEKQRLLHC VVVGGGPTGV EFSGELSDFI TRDVRQRYVH VKDYIRVTLI EANEILSSFD DRLRRYATKQ
301: LTKSGVRLVR GIVKDVKPQK IVLNDGSEVP YGLLVWSTGV GPLPIIQSLD LPKAPGGRIG VDEWLRVSSV QDVFSIGDCS GFVESTGRQT LPALAQVAER
401: QGKYLAALLN KIGKAGAGHA NSAKEIEFGD PFVYRHLGSM ASIGRYKALV DLRQNKEAKG LALAGFLSFF IWRSAYITRV ISWRNRFYVF VNWITTVVFG
501: RDISRL

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.