Factsheet for Zm00001d036557_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	26.02	96.39
EER90248	Sorghum	mitochondrion	89.43	94.18
KRH22445	Soybean	peroxisome	7.15	86.27
Os06t0684000-02	Rice	mitochondrion	81.3	85.03
TraesCS7A01G448800.2	Wheat	mitochondrion, peroxisome	79.84	83.65
TraesCS7B01G348600.1	Wheat	mitochondrion, peroxisome	79.35	83.42
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	76.26	80.03
TraesCS7D01G438100.1	Wheat	peroxisome, plastid	79.84	79.19
Zm00001d049597_P001	Maize	mitochondrion	64.55	67.06
Zm00001d012615_P001	Maize	mitochondrion	60.0	63.84
Zm00001d043266_P002	Maize	mitochondrion	59.35	63.15
TraesCS5A01G412500.1	Wheat	cytosol, mitochondrion, peroxisome	19.51	59.11
TraesCS7A01G468100.1	Wheat	cytosol, mitochondrion, peroxisome	20.81	56.64
TraesCS5A01G006600.1	Wheat	cytosol, mitochondrion, peroxisome	20.49	55.75
TraesCS2A01G465300.1	Wheat	cytosol, mitochondrion, peroxisome	20.49	55.75
TraesCS3B01G115600.1	Wheat	cytosol, mitochondrion, peroxisome	20.16	54.87
TraesCS3B01G604700.1	Wheat	cytosol, mitochondrion, peroxisome	19.84	54.71
TraesCS6A01G202300.1	Wheat	mitochondrion, nucleus, peroxisome	21.79	48.91
TraesCS4A01G212200.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	21.63	45.39
Zm00001d012464_P001	Maize	mitochondrion	28.78	33.71
Zm00001d004457_P001	Maize	mitochondrion	7.15	27.33
Zm00001d021804_P001	Maize	mitochondrion	25.53	25.95

Protein Annotations

EntrezGene:103629626	MapMan:2.4.2.1.2	Gene3D:3.50.50.100	UniProt:A0A1D6LPC7	ProteinID:AQK81354.1	ProteinID:AQK81356.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI000843F73B
EnsemblPlantsGene:Zm00001d036557	EnsemblPlants:Zm00001d036557_P002	EnsemblPlants:Zm00001d036557_T002	SEG:seg	:	:

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B1 mitochondrial

Coordinates

chr6:+:92017713..92023571

Molecular Weight (calculated)

68643.4 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.140

Length

615 amino acids

Sequence
(BLAST)

001: MGFSFFTSRA GARLLDGIAR PGFSTAALLL TAASGGGLVA YADSAAESAP DPSQDAPRKK VVVLGTGWAG TSFLKNLDCS RYEVKVISPR NYFAFTPLLP
101: SVTCGTVEPR SIIEPVRRMF EKKNKDVTFC EAECFKIDAN RKTVHCRSAV GTNLDGNGDF MLDYDYLVVA LGATVSTFNT PGVLEHCCFL KIYIHEATNC
201: IIYHVIFSAF LYHDMASHHE SQEVEDAQKI RKGVIDCFEK ASLPNISEEE KRKILHFVVI GGGPTGVEFA AEMHDFLVED LVKLYPAIQD LVKITIIQSA
301: EHILTMFDER IASFAEQKFK RDGIEVCTGF RVIKVSDDLI TMKRKSDGEE LSVPYGMAVW SAGIGTRPVV MDFMQQIGQT NRRALATNEW LRVRECEGVY
401: AIGDCATVSQ RKIMDDISTV FKMADKDNSG TLTLKEINGV LDDICIRYPQ VELYMKSMHM LDIADLIKGA VGDSHKESMV VDIEEFKKAL RHVDSQVKNA
501: PATAQVAAQQ GQYLAQCFNK MEKCREEPEG PLRMAGGSGR HFFRPFRYKH FGQFAPLGGE QAAAELPGDW VSMGHSTQWL WYSVYASKQV SWRTRVLVVS
601: DWTRRFIFGR DSSRI

Best Arabidopsis Sequence Match ( AT4G28220.1 )
(BLAST)

001: MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I

Arabidopsis Description

NDB1External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.