Factsheet for Zm00001d037405_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G412500.1	Wheat	cytosol, mitochondrion, peroxisome	46.99	38.42
TraesCS7A01G468100.1	Wheat	cytosol, mitochondrion, peroxisome	51.2	37.61
TraesCS2A01G465300.1	Wheat	cytosol, mitochondrion, peroxisome	50.0	36.73
TraesCS5A01G006600.1	Wheat	cytosol, mitochondrion, peroxisome	50.0	36.73
TraesCS3B01G115600.1	Wheat	cytosol, mitochondrion, peroxisome	49.4	36.28
TraesCS3B01G604700.1	Wheat	cytosol, mitochondrion, peroxisome	47.59	35.43
TraesCS6A01G202300.1	Wheat	mitochondrion, nucleus, peroxisome	50.6	30.66
TraesCS4A01G212200.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	50.6	28.67
Zm00001d036557_P002	Maize	mitochondrion	96.39	26.02
EER90248	Sorghum	mitochondrion	72.89	20.72
Os06t0684000-02	Rice	mitochondrion	68.67	19.39
TraesCS7B01G348600.1	Wheat	mitochondrion, peroxisome	66.87	18.97
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	66.27	18.77
TraesCS7A01G448800.2	Wheat	mitochondrion, peroxisome	66.27	18.74
TraesCS7D01G438100.1	Wheat	peroxisome, plastid	66.87	17.9
Zm00001d049597_P001	Maize	mitochondrion	55.42	15.54
Zm00001d012615_P001	Maize	mitochondrion	53.01	15.22
Zm00001d043266_P002	Maize	mitochondrion	53.01	15.22
Zm00001d012464_P001	Maize	mitochondrion	33.73	10.67
Zm00001d021804_P001	Maize	mitochondrion	34.34	9.42
Zm00001d004457_P001	Maize	mitochondrion	0.0	0.0
KRH22445	Soybean	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d037405_P001	EnsemblPlants:Zm00001d037405_T001	EnsemblPlantsGene:Zm00001d037405	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	PFAM:PF07992	ProteinID:AQK83907.1	SUPFAM:SSF51905
UniParc:UPI000844C32E	UniProt:A0A1D6LXK7	MapMan:35.1	:	:	:

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B1 mitochondrial

Coordinates

chr6:+:124641250..124642962

Molecular Weight (calculated)

18894.8 Da

IEP (calculated)

5.038

GRAVY (calculated)

0.163

Length

166 amino acids

Sequence
(BLAST)

001: MLDYDYLVVA LGAIVSTFNT PGVLEHYCFL KIYIHEATNC IIYHVIFSAF LYHDMASHHE SQEVEDAQKI RKGVIDCFEK ASLPNISEEE KRKILHFVVI
101: GGGPTGVEFA AEMHDFLVED LVKLYPAIQD LVKITIIQSA EHILTMFDER IASFVEQKFK RAGSEI

Best Arabidopsis Sequence Match ( AT4G28220.1 )
(BLAST)

001: MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I

Arabidopsis Description

NDB1External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.