Factsheet for TraesCS5A01G006600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G468100.1	Wheat	cytosol, mitochondrion, peroxisome	99.11	99.11
TraesCS2A01G465300.1	Wheat	cytosol, mitochondrion, peroxisome	98.67	98.67
TraesCS5A01G412500.1	Wheat	cytosol, mitochondrion, peroxisome	87.61	97.54
TraesCS3B01G115600.1	Wheat	cytosol, mitochondrion, peroxisome	95.58	95.58
TraesCS6A01G202300.1	Wheat	mitochondrion, nucleus, peroxisome	88.5	72.99
TraesCS4A01G212200.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	88.94	68.6
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	36.73	50.0
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	57.08	22.01
TraesCS7A01G448800.2	Wheat	mitochondrion, peroxisome	56.64	21.81
Os06t0684000-02	Rice	mitochondrion	55.75	21.43
EER90248	Sorghum	mitochondrion	54.42	21.06
Zm00001d036557_P002	Maize	mitochondrion	55.75	20.49
TraesCS7A01G306600.1	Wheat	mitochondrion	49.56	19.44
TraesCS3A01G316500.1	Wheat	mitochondrion	45.58	17.98
TraesCS3A01G349900.1	Wheat	mitochondrion	27.43	12.38
TraesCS2A01G203200.1	Wheat	plastid	29.2	11.79
KRH22445	Soybean	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5A01G006600.1	EnsemblPlantsGene:TraesCS5A01G006600	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:IPR036188
PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	PFAM:PF07992	SEG:seg	SUPFAM:SSF51905	MapMan:35.1

Description

No Description!

Coordinates

chr5A:+:3991976..3993111

Molecular Weight (calculated)

25186.5 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.308

Length

226 amino acids

Sequence
(BLAST)

001: MDRSLREKEK MREREGRRGS RKREERGEGG AALTDGSRGG AADGGLSGCA TTPRSSCAAQ PSPRRLNRRF PSQLGPLLPL PRRPTECFKI DLMIHYRSAV
101: GTNLDGNGDL MVDYDYLVLA LGVTMNTFNT PGVMEHCHFL KVVEDAQKIR KSVIDCFEKA SLPNLSEEEK RKILHFVIIS GGPTGVEFAV ELHDFLVEDL
201: VKLYPAIEEN SQLLLALRLF LLFIAQ

Best Arabidopsis Sequence Match ( AT4G28220.1 )
(BLAST)

001: MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I

Arabidopsis Description

NDB1External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.