Factsheet for Zm00001d041179_P004

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15850	Sorghum	cytosol, plastid	66.19	82.14
TraesCS5B01G121600.1	Wheat	cytosol	55.4	69.37
TraesCSU01G134600.1	Wheat	cytosol, plastid	61.39	67.37
TraesCS5A01G120600.1	Wheat	cytosol	60.91	66.49
Os12t0225200-01	Rice	cytosol	18.7	53.42
GSMUA_Achr3P19240_001	Banana	plastid	38.37	46.92
CDX83451	Canola	plastid	37.17	46.69
Solyc04g008520.2.1	Tomato	plastid	37.65	46.31
Bra000335.1-P	Field mustard	plastid	36.69	46.08
CDX95578	Canola	plastid	36.21	45.62
PGSC0003DMT400075665	Potato	plastid	37.17	45.59
KRH01858	Soybean	endoplasmic reticulum	34.77	45.45
VIT_05s0094g01390.t01	Wine grape	plastid	34.77	44.62
CDY30448	Canola	plastid	36.21	44.41
Bra037673.1-P	Field mustard	plastid	36.21	44.41
CDY23410	Canola	plastid	36.45	44.31
AT2G43950.1	Thale cress	plastid	36.45	44.31
Zm00001d017171_P001	Maize	plastid	39.57	44.24
CDY29048	Canola	nucleus	13.67	22.18

Protein Annotations

EnsemblPlants:Zm00001d041179_P004	EnsemblPlants:Zm00001d041179_T004	EnsemblPlantsGene:Zm00001d041179	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	PANTHER:PTHR35484
PANTHER:PTHR35484:SF1	ProteinID:ONM32581.1	SEG:seg	UniParc:UPI0008449869	UniProt:A0A1D6MUR6	MapMan:24.4.5

Description

Outer envelope pore protein 37 chloroplastic

Coordinates

chr3:-:102862285..102878926

Molecular Weight (calculated)

46491.9 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.229

Length

417 amino acids

Sequence
(BLAST)

001: MLLLELVATD TTCILHSLLC SPPLSFLSHS PHYMAAPVLL TIPTMDEEGA PPPAPASPSR TPPQQEPKPA VLRWRPPVRV TSEFDSERRL FSHRLSCRVL
101: DGLAKLRLRI SHGAGGGGIL WGPTDVGLLA RNFSVVVDPA TRGAVLRGAA DLAGSLRLRA SHNTKNCQTG EQSYYIHVGC SALCLSMSCN YEYDKSIVSC
201: IQLDRCFQFK YHSVKEQQGE VAITANLRDS PCKIELSSLV PPNGPPRATF FFPNGEVSIK EKILDERDRI LSVNGLVKSR VLHGVCTAVY NDNVMSIKYR
301: YKDDEVSFIP SISLPSNSLS FAFKRQLTPL DKLSYWYNFD TNYWGAIYKH KAHKHLKWKA GYESDNRLGW ASLWVGDAGG STKEAPLKAK IHLTLKVPQD
401: NIQNSVVVFH VKKRWDF

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.