Factsheet for PGSC0003DMT400075665

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008520.2.1	Tomato	plastid	96.18	96.46
VIT_05s0094g01390.t01	Wine grape	plastid	63.82	66.77
KRH01858	Soybean	endoplasmic reticulum	58.82	62.7
Bra000335.1-P	Field mustard	plastid	60.0	61.45
Bra037673.1-P	Field mustard	plastid	61.18	61.18
CDX95578	Canola	plastid	59.41	61.03
CDX83451	Canola	plastid	59.41	60.84
CDY23410	Canola	plastid	61.18	60.64
CDY30448	Canola	plastid	60.0	60.0
AT2G43950.1	Thale cress	plastid	60.29	59.77
GSMUA_Achr3P19240_001	Banana	plastid	56.47	56.3
HORVU6Hr1G055870.1	Barley	plastid	49.41	48.98
TraesCS6D01G201700.1	Wheat	golgi	50.29	46.85
TraesCS5B01G121600.1	Wheat	cytosol	45.88	46.85
TraesCS6B01G248100.1	Wheat	plastid	49.41	46.28
TraesCS6A01G218500.1	Wheat	golgi	49.41	46.03
EES07130	Sorghum	plastid	49.41	45.53
EES15850	Sorghum	cytosol, plastid	44.71	45.24
Os02t0608900-02	Rice	plastid	49.12	45.14
Zm00001d017171_P001	Maize	plastid	49.41	45.04
TraesCSU01G134600.1	Wheat	cytosol, plastid	46.47	41.58
TraesCS5A01G120600.1	Wheat	cytosol	45.59	40.58
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	45.59	37.17
Os12t0225200-01	Rice	cytosol	13.53	31.51
CDY29048	Canola	nucleus	21.18	28.02

Protein Annotations

EntrezGene:102590905	MapMan:24.4.5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009706	GO:GO:0009941	GO:GO:0016020
GO:GO:0031359	GO:GO:0034220	UniProt:M1CVK9	InterPro:OEP37-like	EnsemblPlantsGene:PGSC0003DMG400029438	PGSC:PGSC0003DMG400029438
EnsemblPlants:PGSC0003DMT400075665	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2	UniParc:UPI0002956A9E	RefSeq:XP_006355015.1	SEG:seg

Description

Outer envelope protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029438]

Coordinates

chr4:-:3500748..3506813

Molecular Weight (calculated)

38085.4 Da

IEP (calculated)

8.034

GRAVY (calculated)

-0.384

Length

340 amino acids

Sequence
(BLAST)

001: MAESKLELKS APNPNSLIVS APPSSPPESP PVTTGGGFVP AVWFRQRPKI RVTTEFDSDS SVFFHRVSCK VLDSLAKLKF SFQNNGKGEL SDPQLALTSK
101: YLSLHYDIEE KNALVNASFD VAPGLQFKAV HEVKSQQGEL AMVADLAGPA YKFELSSAVP AIGKPRATIR FPLGEVSLEE KEEEEEEEQA KRILSVNGIL
201: KGQIMNGVCT AKYKDEALDL RYCFKDEQMT FIPSISLPSN AMSFTFKRQF GPSDKLSYWY NLDTNYWSTV YKHNIGKDFK FKAGYDSEVR LGWASLWVGE
301: ESGKAKTAPM KMKVQFMLQV PQDDITSSSL MFRAKKRWDI

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.