CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83451	Canola	plastid	96.68	96.39
CDY30448	Canola	plastid	85.2	82.94
CDY23410	Canola	plastid	84.59	81.63
AT2G43950.1	Thale cress	plastid	84.29	81.34
KRH01858	Soybean	endoplasmic reticulum	60.12	62.38
VIT_05s0094g01390.t01	Wine grape	plastid	61.03	62.15
Solyc04g008520.2.1	Tomato	plastid	61.93	60.47
PGSC0003DMT400075665	Potato	plastid	61.03	59.41
GSMUA_Achr3P19240_001	Banana	plastid	58.91	57.18
HORVU6Hr1G055870.1	Barley	plastid	51.36	49.56
TraesCS6D01G201700.1	Wheat	golgi	51.96	47.12
TraesCS6B01G248100.1	Wheat	plastid	51.66	47.11
TraesCS6A01G218500.1	Wheat	golgi	51.66	46.85
CDY29048	Canola	nucleus	35.95	46.3
TraesCS5B01G121600.1	Wheat	cytosol	46.53	46.25
EES07130	Sorghum	plastid	50.45	45.26
Os02t0608900-02	Rice	plastid	50.45	45.14
Zm00001d017171_P001	Maize	plastid	50.76	45.04
EES15850	Sorghum	cytosol, plastid	45.32	44.64
TraesCSU01G134600.1	Wheat	cytosol, plastid	46.53	40.53
TraesCS5A01G120600.1	Wheat	cytosol	45.62	39.53
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	45.62	36.21
Os12t0225200-01	Rice	cytosol	12.39	28.08

Protein Annotations

EnsemblPlants:CDX95578	EnsemblPlantsGene:GSBRNA2T00101439001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2	ProteinID:CDX95578
ProteinID:CDX95578.1	SEG:seg	UniParc:UPI0004EE8B5E	MapMan:24.4.5	:	:

Description

BnaC03g24590D

Coordinates

chrLK031890:-:64240..66322

Molecular Weight (calculated)

37535.8 Da

IEP (calculated)

9.542

GRAVY (calculated)

-0.471

Length

331 amino acids

Sequence
(BLAST)

001: MADPSPQSAT RTPALQSPTS EPPPPPPPCS VFPFPKGLNR PKLRVTSEFD SDTLLFFNKV SCKIFDNLAK LKLSFQNNTQ REVSQPQVSF TSKYVSVLYD
101: VEEKNAFVKS TVDVSPRLQL RALHNVKAQQ GEVAMEANLA EPGYSLELSS PVPIGYPRAT LKFPLGEVSV QEKEVEEEEK SKRIVSVNGV LKRQAMNGVC
201: SALYTDEELR LRYAYKDEAL SFIPTISLPS NAASFAFKRR FSPSDKLSYW YNFDSNMWSA VYKRTYGKDY KFKAGYDSDV RLGWASLWVG DEDGKVKTTP
301: MKMKVQFMLQ VPQDDIKTSV LMFRVKKRWD L

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.