Factsheet for TraesCSU01G134600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G120600.1	Wheat	cytosol	97.63	97.12
TraesCS5B01G121600.1	Wheat	cytosol	84.74	96.7
EES15850	Sorghum	cytosol, plastid	63.95	72.32
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	67.37	61.39
Os12t0225200-01	Rice	cytosol	23.42	60.96
GSMUA_Achr3P19240_001	Banana	plastid	43.42	48.39
CDX83451	Canola	plastid	41.58	47.59
Bra000335.1-P	Field mustard	plastid	41.32	47.29
Solyc04g008520.2.1	Tomato	plastid	42.11	47.2
KRH01858	Soybean	endoplasmic reticulum	39.47	47.02
CDX95578	Canola	plastid	40.53	46.53
PGSC0003DMT400075665	Potato	plastid	41.58	46.47
AT2G43950.1	Thale cress	plastid	41.84	46.36
VIT_05s0094g01390.t01	Wine grape	plastid	38.42	44.92
Bra037673.1-P	Field mustard	plastid	39.74	44.41
CDY30448	Canola	plastid	39.47	44.12
CDY23410	Canola	plastid	39.74	44.02
CDY29048	Canola	nucleus	12.89	19.07

Protein Annotations

MapMan:24.4.5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009706	GO:GO:0009941	GO:GO:0016020	GO:GO:0031359
InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF1	EnsemblPlantsGene:TraesCSU01G134600	EnsemblPlants:TraesCSU01G134600.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:115095814..115111997

Molecular Weight (calculated)

42079.2 Da

IEP (calculated)

9.680

GRAVY (calculated)

-0.439

Length

380 amino acids

Sequence
(BLAST)

001: MAAPALLSAP PPPPPMEEDG LTSHVAPTPT PPPSKRGFLR GRPPIRVTSE FDSERQLFSH RISCRVLNGL AKLRLRVHHG AAGGAPTPEV ALMGRNFSAV
101: VDTASRGAVL RGTADLAGSL HLSAAHNTKN YQNGEQSYIH IGCSTHCLSI SCDHEYDDST VSCIHMDRYF QLKYNSRKEG QGEVAVTTNL GDSPCKIELS
201: SLVPPDGLPR ATFLFPNGEV SVKEKKLDEG EKILSVNGIV KSHILNGVCT ALYNDNMMNI KYRYKDDELS FIPSLTLPSN SLSFAFKRQL TPSDKFSYRY
301: HFDTNYWSAV YKQKASKHVK WKAGYGSDER LGWASVWVGD AGGKTKEAPL KTKVQLMIKV PQNNIRNSTV VFRVKKRWDF

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.