Factsheet for TraesCS5A01G120600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G134600.1	Wheat	cytosol, plastid	97.12	97.63
TraesCS5B01G121600.1	Wheat	cytosol	84.29	96.7
EES15850	Sorghum	cytosol, plastid	62.83	71.43
Os12t0225200-01	Rice	cytosol	23.3	60.96
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	66.49	60.91
GSMUA_Achr3P19240_001	Banana	plastid	44.24	49.56
KRH01858	Soybean	endoplasmic reticulum	39.27	47.02
CDX83451	Canola	plastid	40.58	46.69
Bra000335.1-P	Field mustard	plastid	40.31	46.39
Solyc04g008520.2.1	Tomato	plastid	41.1	46.31
AT2G43950.1	Thale cress	plastid	41.36	46.06
CDX95578	Canola	plastid	39.53	45.62
PGSC0003DMT400075665	Potato	plastid	40.58	45.59
VIT_05s0094g01390.t01	Wine grape	plastid	37.7	44.31
CDY30448	Canola	plastid	39.01	43.82
Bra037673.1-P	Field mustard	plastid	39.01	43.82
CDY23410	Canola	plastid	39.27	43.73
TraesCS6A01G218500.1	Wheat	golgi	41.62	43.56
CDY29048	Canola	nucleus	12.3	18.29

Protein Annotations

EnsemblPlants:TraesCS5A01G120600.1	EnsemblPlantsGene:TraesCS5A01G120600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF1	SEG:seg
MapMan:24.4.5	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:258034341..258063124

Molecular Weight (calculated)

42235.2 Da

IEP (calculated)

9.587

GRAVY (calculated)

-0.431

Length

382 amino acids

Sequence
(BLAST)

001: MAAPALLSAP PPPPPMEEDG LTSHVAPSPT TPPPPSKRGF LRGRPPIRVT SEFDSERQLF SHRISCRVLN GLAKLRFRVH HGAAGGAPTP EVALMGRNFS
101: AVVDTASRSA VLRGTADLAG SLHLSAAHNT KNYQNGEQSY IHIGCSTHCL SISCDHEYDD STVSCIHMDR YFQLKYNSRK EGQGEVAVTT SLGDSPCKIE
201: LSSLVPPDGL PRATFLFPNG EVSVKEKKLD EGEKILSVNG IVKSHVLNGV CTALYNDNMM NIKYRYKDDE LSFIPSLTLP SNSLSFAFKR QLTPSDKFSY
301: RYHFDTNYWS AVYKQKASKH VKWKAGYGSD ERLGWASVWV GDAGGKTKEA PLKTKVQLVI KVPQNNIHNS TVVFRVKKRW DF

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.