CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30448	Canola	plastid	93.59	94.41
CDX95578	Canola	plastid	81.63	84.59
CDX83451	Canola	plastid	80.76	83.43
VIT_05s0094g01390.t01	Wine grape	plastid	61.22	64.62
Solyc04g008520.2.1	Tomato	plastid	60.93	61.65
PGSC0003DMT400075665	Potato	plastid	60.64	61.18
KRH01858	Soybean	endoplasmic reticulum	56.56	60.81
GSMUA_Achr3P19240_001	Banana	plastid	56.56	56.89
HORVU6Hr1G055870.1	Barley	plastid	50.73	50.73
TraesCS6D01G201700.1	Wheat	golgi	51.6	48.49
TraesCS6B01G248100.1	Wheat	plastid	51.31	48.48
TraesCS6A01G218500.1	Wheat	golgi	51.31	48.22
EES07130	Sorghum	plastid	50.73	47.15
TraesCS5B01G121600.1	Wheat	cytosol	44.9	46.25
Os02t0608900-02	Rice	plastid	49.85	46.22
Zm00001d017171_P001	Maize	plastid	50.15	46.11
EES15850	Sorghum	cytosol, plastid	44.31	45.24
CDY29048	Canola	nucleus	31.78	42.41
TraesCSU01G134600.1	Wheat	cytosol, plastid	44.02	39.74
TraesCS5A01G120600.1	Wheat	cytosol	43.73	39.27
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	44.31	36.45
Os12t0225200-01	Rice	cytosol	11.95	28.08

Protein Annotations

EnsemblPlants:CDY23410	EnsemblPlantsGene:GSBRNA2T00022019001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	ncoils:Coil	PANTHER:PTHR35484
PANTHER:PTHR35484:SF2	ProteinID:CDY23410	ProteinID:CDY23410.1	SEG:seg	SUPFAM:SSF101447	UniParc:UPI0004EE2B87
UniProt:A0A078GAE5	MapMan:24.4.5	:	:	:	:

Description

BnaC04g49380DBnaC04g49380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAE5]

Coordinates

chrLK032143:-:326177..328357

Molecular Weight (calculated)

39069.6 Da

IEP (calculated)

9.415

GRAVY (calculated)

-0.541

Length

343 amino acids

Sequence
(BLAST)

001: MADQSPQSSS LSTSPPPPPP PPTLQSTTSE PPPPPTRSSL FPFLKSLNRP KLRVTSEFDS DSLLFLNKVS CKLFDNLAKL KLSFQNNSQR EVTQPQLSLT
101: SKYLSVLYDV EEKNTFIKST VDVSPRLQLR ALHNVNAQQG EVAMEANLAE PGYSLELSSP VPIGYPRATL KFPLGEVSIQ EREEEEEEEE RKNKRMLSVN
201: GILKRQVMDG VCSALYTDEE LRLRYAYKDE ALSFIPTISL PSNAASFAFK RRFSPSDKLS YWYKFDSNMW SAVYKRTYGK DYKFKAGYDS EVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKT SVLMFRVKKR WDI

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.