CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037673.1-P	Field mustard	plastid	97.65	97.65
CDY23410	Canola	plastid	94.41	93.59
CDX95578	Canola	plastid	82.94	85.2
CDX83451	Canola	plastid	82.06	84.04
VIT_05s0094g01390.t01	Wine grape	plastid	60.88	63.69
Solyc04g008520.2.1	Tomato	plastid	60.88	61.06
PGSC0003DMT400075665	Potato	plastid	60.0	60.0
KRH01858	Soybean	endoplasmic reticulum	55.88	59.56
GSMUA_Achr3P19240_001	Banana	plastid	56.76	56.6
HORVU6Hr1G055870.1	Barley	plastid	49.41	48.98
TraesCS6B01G248100.1	Wheat	plastid	50.59	47.38
TraesCS6D01G201700.1	Wheat	golgi	50.59	47.12
TraesCS6A01G218500.1	Wheat	golgi	50.29	46.85
TraesCS5B01G121600.1	Wheat	cytosol	44.71	45.65
EES07130	Sorghum	plastid	49.41	45.53
Os02t0608900-02	Rice	plastid	49.12	45.14
EES15850	Sorghum	cytosol, plastid	44.41	44.94
Zm00001d017171_P001	Maize	plastid	48.82	44.5
CDY29048	Canola	nucleus	32.06	42.41
TraesCSU01G134600.1	Wheat	cytosol, plastid	44.12	39.47
TraesCS5A01G120600.1	Wheat	cytosol	43.82	39.01
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	44.41	36.21
Os12t0225200-01	Rice	cytosol	11.76	27.4

Protein Annotations

EnsemblPlants:CDY30448	EnsemblPlantsGene:GSBRNA2T00045152001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2
ProteinID:CDY30448	ProteinID:CDY30448.1	SEG:seg	UniParc:UPI0004EEBE70	UniProt:A0A078H0U8	MapMan:24.4.5

Description

BnaA04g25490DBnaA04g25490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0U8]

Coordinates

chrLK032253:-:302103..304290

Molecular Weight (calculated)

38719.2 Da

IEP (calculated)

9.416

GRAVY (calculated)

-0.524

Length

340 amino acids

Sequence
(BLAST)

001: MADQSPQSPT LSTSPPPHPP TLQSTTSEPP PPPTRPSLFP FLTSLNRPKL RVTSEFDSDS LLFLNKVSCK LFDNLAKLKL SFQNNSQREV TQPQLSLTSK
101: YLSVLYDVEE KNTFIKSTVD VSPRLQLRAL HNVNAQQGEV AMEANLAEPG YSLELSSPVP IGYPRATLKF PLGEVSIQER EEEEEEEAKN KRMLSINGIL
201: KRQVMDGVCS ALYTDEELRL KYAYKDEALS FIPTISLPSN AASFAFKRRF SPSDKLSYWY KFDSNMWSAV YKRTYGKDYK FKAGYDSEVR LGWASLWVGD
301: EAGKVKTTPR KMKVQFMLQV PQDDIKTSVL MFRVKKRWDI

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.