Factsheet for TraesCS5B01G121600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G134600.1	Wheat	cytosol, plastid	96.7	84.74
TraesCS5A01G120600.1	Wheat	cytosol	96.7	84.29
EES15850	Sorghum	cytosol, plastid	72.67	72.02
Os12t0225200-01	Rice	cytosol	26.13	59.59
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	69.37	55.4
GSMUA_Achr3P19240_001	Banana	plastid	50.45	49.27
CDX83451	Canola	plastid	47.45	47.59
KRH01858	Soybean	endoplasmic reticulum	45.35	47.34
Bra000335.1-P	Field mustard	plastid	47.15	47.29
AT2G43950.1	Thale cress	plastid	48.05	46.65
Solyc04g008520.2.1	Tomato	plastid	47.45	46.61
CDX95578	Canola	plastid	46.25	46.53
PGSC0003DMT400075665	Potato	plastid	46.85	45.88
Bra037673.1-P	Field mustard	plastid	45.95	45.0
VIT_05s0094g01390.t01	Wine grape	plastid	43.84	44.92
TraesCS6B01G248100.1	Wheat	plastid	48.95	44.9
CDY23410	Canola	plastid	46.25	44.9
CDY30448	Canola	plastid	45.65	44.71
CDY29048	Canola	nucleus	14.41	18.68

Protein Annotations

EnsemblPlants:TraesCS5B01G121600.1	EnsemblPlantsGene:TraesCS5B01G121600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF1	SEG:seg
MapMan:24.4.5	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:216833642..216863309

Molecular Weight (calculated)

36272.4 Da

IEP (calculated)

10.091

GRAVY (calculated)

-0.363

Length

333 amino acids

Sequence
(BLAST)

001: MAAPALLSAP PPPPPMEEDG LTSHVAPSPN PPPPPSKSGF LRGRPPIGVT SEFDSERQLF SHRISCRVLN GLAKLRLRVH HGAAGGAPTP EVALMGRNFS
101: AVVDAASRGA VLRGTADLAG SLHLSAAHNT KEGQGEVAVT TNLGDSPCKI ELSSLVPPDG LPRATFLFPN GEVSVKEKKL DEGEKILSVN GIVKSHVLNG
201: VCTALYNDNM MNIKYRYKDD ELSFIPSLTL PSNSLSFAFK RQLTPSDKFS YRYHFDTNYW SAVYKQKASK HVKWKAGYGS DERLGWASVW VGDAGGKTKE
301: APLKTKVQLM IKVPQNNIQN STLVFRVKKR WDF

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.