Factsheet for VIT_05s0094g01390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 1
golgi 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008520.2.1	Tomato	plastid	68.31	65.49
PGSC0003DMT400075665	Potato	plastid	66.77	63.82
Bra037673.1-P	Field mustard	plastid	64.62	61.76
KRH01858	Soybean	endoplasmic reticulum	60.31	61.44
CDY23410	Canola	plastid	64.62	61.22
CDX95578	Canola	plastid	62.15	61.03
CDY30448	Canola	plastid	63.69	60.88
Bra000335.1-P	Field mustard	plastid	61.85	60.54
CDX83451	Canola	plastid	61.54	60.24
AT2G43950.1	Thale cress	plastid	63.38	60.06
GSMUA_Achr3P19240_001	Banana	plastid	59.69	56.89
HORVU6Hr1G055870.1	Barley	plastid	50.15	47.52
TraesCS6D01G201700.1	Wheat	golgi	51.69	46.03
TraesCS6B01G248100.1	Wheat	plastid	51.08	45.73
TraesCS6A01G218500.1	Wheat	golgi	51.08	45.48
Zm00001d017171_P001	Maize	plastid	50.77	44.24
EES07130	Sorghum	plastid	50.15	44.17
Os02t0608900-02	Rice	plastid	50.15	44.05
TraesCS5B01G121600.1	Wheat	cytosol	44.92	43.84
EES15850	Sorghum	cytosol, plastid	44.31	42.86
TraesCSU01G134600.1	Wheat	cytosol, plastid	44.92	38.42
TraesCS5A01G120600.1	Wheat	cytosol	44.31	37.7
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	44.62	34.77
CDY29048	Canola	nucleus	21.85	27.63
Os12t0225200-01	Rice	cytosol	11.69	26.03

Protein Annotations

EntrezGene:100264576	wikigene:100264576	MapMan:24.4.5	ProteinID:CBI24755	ProteinID:CBI24755.3	UniProt:D7T2M4
EMBL:FN595507	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009706	GO:GO:0009941	GO:GO:0016020	GO:GO:0031359
GO:GO:0034220	EntrezGene:LOC100264576	wikigene:LOC100264576	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2
UniParc:UPI0001BE27B8	ArrayExpress:VIT_05s0094g01390	EnsemblPlantsGene:VIT_05s0094g01390	EnsemblPlants:VIT_05s0094g01390.t01	RefSeq:XP_002275927	RefSeq:XP_002275927.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24665059..24673118

Molecular Weight (calculated)

36686.6 Da

IEP (calculated)

7.746

GRAVY (calculated)

-0.370

Length

325 amino acids

Sequence
(BLAST)

001: MVETAPPPPP SPNSLVPPTP AAESPSPQGP WLWPRRPSIR LTSEFDSDSS IFFHKISCKL FDSLAKLKLS FQNNNDGEIF DPQLGFISKH LSLHYDLQNH
101: NAFIKGCFDV GSRLHFNAAH DVKAQQGEVA MVADLAGPGY KFELSSAVPA IGFPKATLKF PAGEVSLEEK EEEEVKKMLS INGILQHQIL NGVFSAQFRD
201: DDLKLRYLYK DEQVAFIPSI SMPSNAISFA FKRRFSPSDK LSYWYNLDSN YWSTVYKHTV GKDYKFKVGY DSEVRLGWAS LWVGDEGGNA KSTPMKLKVQ
301: FMLQVPQDDI HSSALMFRVK KRWDI

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.