CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83451	Canola	plastid	47.08	36.45
CDX95578	Canola	plastid	46.3	35.95
CDY30448	Canola	plastid	42.41	32.06
CDY23410	Canola	plastid	42.41	31.78
AT2G43950.1	Thale cress	plastid	42.41	31.78
Os12t0225200-01	Rice	cytosol	13.62	23.97
VIT_05s0094g01390.t01	Wine grape	plastid	27.63	21.85
GSMUA_Achr3P19240_001	Banana	plastid	28.4	21.41
Solyc04g008520.2.1	Tomato	plastid	28.02	21.24
PGSC0003DMT400075665	Potato	plastid	28.02	21.18
KRH01858	Soybean	endoplasmic reticulum	26.07	21.0
Zm00001d017171_P001	Maize	plastid	28.02	19.3
EES07130	Sorghum	plastid	27.24	18.97
TraesCS6A01G218500.1	Wheat	golgi	26.07	18.36
TraesCS6D01G201700.1	Wheat	golgi	25.68	18.08
HORVU6Hr1G055870.1	Barley	plastid	24.12	18.08
TraesCS6B01G248100.1	Wheat	plastid	25.29	17.91
Os02t0608900-02	Rice	plastid	25.29	17.57
EES15850	Sorghum	cytosol, plastid	21.4	16.37
TraesCS5B01G121600.1	Wheat	cytosol	18.68	14.41
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	22.18	13.67
TraesCSU01G134600.1	Wheat	cytosol, plastid	19.07	12.89
TraesCS5A01G120600.1	Wheat	cytosol	18.29	12.3

Protein Annotations

EnsemblPlants:CDY29048	EnsemblPlantsGene:GSBRNA2T00041786001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2
ProteinID:CDY29048	ProteinID:CDY29048.1	UniParc:UPI0004EE7252	UniProt:A0A078GWT7	MapMan:24.4.5	:

Description

BnaC07g32540DBnaC07g32540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWT7]

Coordinates

chrLK032229:-:318391..320285

Molecular Weight (calculated)

28800.5 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.540

Length

257 amino acids

Sequence
(BLAST)

001: MSRPASKLLM RDELSLSSSI LQRNCESSAS DLDMAENRGG GGCCPPMDLM RSEPMQLVQV IVPKESAHLT SPTFEPPPPR CFVFPFLKSV NMPKLRVTSE
101: FDSDSLFFFN KVSCKIFDNL AKLKLSFHNN TQRQVSQPQV SFTPKYVSVL YDVEEKNAFV KSTVDVSPRL QLRALHNVKA QQGEQPPEKK ASSSVVSPQK
201: IESPIQKLES KFDTNKAFTG SIVEHTHNLE TNTHGKMQQL SGSQPSKPVS RFKAQRR

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.