Factsheet for Os02t0608900-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G248100.1	Wheat	plastid	77.03	78.51
TraesCS6D01G201700.1	Wheat	golgi	77.03	78.08
TraesCS6A01G218500.1	Wheat	golgi	76.76	77.81
EES07130	Sorghum	plastid	77.03	77.24
Zm00001d017171_P001	Maize	plastid	77.57	76.94
HORVU6Hr1G055870.1	Barley	plastid	71.08	76.68
GSMUA_Achr3P19240_001	Banana	plastid	48.92	53.08
CDX95578	Canola	plastid	45.14	50.45
Bra037673.1-P	Field mustard	plastid	46.22	50.29
VIT_05s0094g01390.t01	Wine grape	plastid	44.05	50.15
CDX83451	Canola	plastid	44.86	50.0
CDY23410	Canola	plastid	46.22	49.85
Bra000335.1-P	Field mustard	plastid	44.59	49.7
Solyc04g008520.2.1	Tomato	plastid	45.41	49.56
CDY30448	Canola	plastid	45.14	49.12
PGSC0003DMT400075665	Potato	plastid	45.14	49.12
KRH01858	Soybean	endoplasmic reticulum	41.89	48.59
AT2G43950.1	Thale cress	plastid	44.59	48.1
Os12t0225200-01	Rice	cytosol	15.14	38.36
CDY29048	Canola	nucleus	17.57	25.29

Protein Annotations

MapMan:24.4.5	EntrezGene:4329941	EMBL:AK068690	ProteinID:BAD19596.1	ProteinID:BAD20156.1	ProteinID:BAF09305.1
ProteinID:BAS79695.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	EnsemblPlantsGene:Os02g0608900	EnsemblPlants:Os02t0608900-02	PANTHER:PTHR35484
PANTHER:PTHR35484:SF2	UniProt:Q6K1X5	SUPFAM:SSF101447	UniParc:UPI00003758EF	RefSeq:XP_015626974.1	SEG:seg

Description

Similar to Epstein-Barr virus (B95-8 isolate) U2-IR2 domain encoding nuclear protein EBNA2, complete cds. (Os02t0608900-01);Similar to Epstein-Barr virus (B95-8 isolate) U2-IR2 domain encoding nuclear protein EBNA2, complete cds. (Os02t0608900-02)

Coordinates

chr2:-:23894669..23898797

Molecular Weight (calculated)

41078.0 Da

IEP (calculated)

9.626

GRAVY (calculated)

-0.480

Length

370 amino acids

Sequence
(BLAST)

001: MATTTTTSSS SSNSQNPNPF NLPPWLRSLR CPFTFLCPPP PPPPPPPPPP PPPPPPLEVV SPSPRWRRPG LRVTTEYDSE EAMFAHKVSC KVAGGLAKLR
101: LSFQSDPSGQ GLGEEGDPRR QLFVAPVVGL IAKNFSVLYD VEARNALLSG QGSLPGGAIQ LRGSHDVKER QGEVSVITRL GDPSYKLELS SLVPYNGLPR
201: ATLHFPIGQV SVEERRNEAD EKMLSLYGIA KSNFLDGILT AQYSENDINL RYCYKDNELT LIPSVSLPSN AVSLGFKRRF GPSDKLSYRY DFTTDDWNAV
301: YKRTVGKDFK VKAGYDSEVR VGWASVWVGQ EDGKAKTAPM KTKLQLMLQV PQDNFRNPTF LFRVKKRWDL

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.