Factsheet for TraesCS6B01G248100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G218500.1	Wheat	golgi	97.52	96.99
TraesCS6D01G201700.1	Wheat	golgi	93.66	93.15
HORVU6Hr1G055870.1	Barley	plastid	85.12	90.09
Os02t0608900-02	Rice	plastid	78.51	77.03
EES07130	Sorghum	plastid	74.66	73.44
Zm00001d017171_P001	Maize	plastid	74.38	72.39
GSMUA_Achr3P19240_001	Banana	plastid	50.96	54.25
CDX95578	Canola	plastid	47.11	51.66
Bra037673.1-P	Field mustard	plastid	48.21	51.47
CDY23410	Canola	plastid	48.48	51.31
CDX83451	Canola	plastid	46.83	51.2
VIT_05s0094g01390.t01	Wine grape	plastid	45.73	51.08
Bra000335.1-P	Field mustard	plastid	46.56	50.9
KRH01858	Soybean	endoplasmic reticulum	44.63	50.78
CDY30448	Canola	plastid	47.38	50.59
Solyc04g008520.2.1	Tomato	plastid	47.11	50.44
AT2G43950.1	Thale cress	plastid	47.38	50.15
PGSC0003DMT400075665	Potato	plastid	46.28	49.41
TraesCS5B01G121600.1	Wheat	cytosol	44.9	48.95
CDY29048	Canola	nucleus	17.91	25.29

Protein Annotations

EnsemblPlants:TraesCS6B01G248100.1	EnsemblPlantsGene:TraesCS6B01G248100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	InterPro:OEP37-like	PANTHER:PTHR35484	PANTHER:PTHR35484:SF2	SEG:seg
SUPFAM:SSF101447	MapMan:24.4.5	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:444746446..444749885

Molecular Weight (calculated)

40445.1 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.519

Length

363 amino acids

Sequence
(BLAST)

001: MATATTSSSS STPKNPNPFN LPPWLRCPLT FLCPPPPSPP PPPPPPTPPP PPPEPTVVAP AQRYRRPGLR VTTEYDSEEA LFAHKVSCKL AGGLAKLRLS
101: FQSDQQGRGE DPRQLFGAPV LSFFTKHFSA MYDVEGRNAL LRGNASLPGG AVQLRASHDV KEQEGEVSVI TRLGDPSYRL EISSLVPYSG LPRATLHFPI
201: GQVSVEERTN EEDQKMLSVY GIAKTDFLDG ILTAQYNEND LNLRYCYKDN ELTLIPSVSL PSNAVSLDFK RRFGSSDKLS YHFNFDTDEW NAVYKHTIGK
301: NYKVKAGYDS EVRVGWASIW AGQEEGKAKT APMKMKVQLM LQVPQDNIRN PSLLFRVKKR WDL

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.