CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G121600.1	Wheat	cytosol	72.02	72.67
Zm00001d041179_P004	Maize	cytosol, extracellular, vacuole	82.14	66.19
TraesCSU01G134600.1	Wheat	cytosol, plastid	72.32	63.95
TraesCS5A01G120600.1	Wheat	cytosol	71.43	62.83
Os12t0225200-01	Rice	cytosol	26.79	61.64
KRH01858	Soybean	endoplasmic reticulum	44.35	46.71
GSMUA_Achr3P19240_001	Banana	plastid	47.32	46.63
CDX83451	Canola	plastid	45.24	45.78
AT2G43950.1	Thale cress	plastid	46.43	45.48
CDX95578	Canola	plastid	44.64	45.32
Bra000335.1-P	Field mustard	plastid	44.64	45.18
Solyc04g008520.2.1	Tomato	plastid	45.54	45.13
Bra037673.1-P	Field mustard	plastid	45.54	45.0
PGSC0003DMT400075665	Potato	plastid	45.24	44.71
CDY30448	Canola	plastid	44.94	44.41
CDY23410	Canola	plastid	45.24	44.31
VIT_05s0094g01390.t01	Wine grape	plastid	42.86	44.31
EES07130	Sorghum	plastid	47.62	43.36
CDY29048	Canola	nucleus	16.37	21.4

Protein Annotations

EnsemblPlants:EES15850	EnsemblPlantsGene:SORBI_3008G078400	EntrezGene:8058157	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0034220	InterPro:OEP37-like	PANTHER:PTHR35484
PANTHER:PTHR35484:SF1	ProteinID:EES15850	ProteinID:EES15850.1	RefSeq:XP_002442012.1	SEG:seg	unigene:Sbi.8566
UniParc:UPI0001A880E7	UniProt:C5YTS7	MapMan:24.4.5	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:12304662..12312583

Molecular Weight (calculated)

37080.5 Da

IEP (calculated)

10.207

GRAVY (calculated)

-0.342

Length

336 amino acids

Sequence
(BLAST)

001: MAAPALLPPP TMDEEGAAPP APATPSPAPP PLQPEPKPPL LRRLPPVRVT SEFDSERRLF SHRLSCRVLD GVAKLRLRIS HGAGGGGIPW GPPEVGVLAR
101: NFSVVVDPAT RGAVLRGAAD LAGSLRLRAS HNTKEQQGEV AITANLRDSP CKIELSSLVP PNALPRATFF FPNGEVSIKE KILDEGDRIL SVNGLVKSHV
201: LNGLCTAVYN DNAMNIKYRY KDDEISFVPS ISLPSNTLSF AFKRQLTPLD KLSYWYNFDT NYWSAIYKHK ANKHLKWKAG YESDNRLGWA SLWVGDAGGS
301: TKEVPFKAKV RLTLKVPQDN MRNSTVVFHV KKRWDF

Best Arabidopsis Sequence Match ( AT2G43950.1 )
(BLAST)

001: MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV
101: SFTSKHVSVL YDVEEKNTFI KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI SLQEKDEEEE EKQKRTLSVN
201: GILKRQVMNG VCTALYTDEE LRLRYAYKDD ALSFIPSISL PSNAASFAFK RRFSPSDKLS YWYNFDSNMW SAVYKRTYGK DYKLKAGYDS DVRLGWASLW
301: VGDEAGKVKT TPMKMKVQFM LQVPQDDIKS SVLMFRVKKR WDI

Arabidopsis Description

OEP37Outer envelope pore protein 37, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80565]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.