Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19439 | Sorghum | plastid | 94.11 | 97.56 |
| TraesCS1D01G238700.1 | Wheat | plastid | 87.51 | 90.83 |
| TraesCS1B01G250300.1 | Wheat | plastid | 87.51 | 90.83 |
| TraesCS1A01G233600.1 | Wheat | plastid | 87.28 | 90.59 |
| Os05t0378900-01 | Rice | plastid | 85.51 | 88.64 |
| HORVU1Hr1G057490.3 | Barley | plastid | 32.51 | 80.7 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 14.84 | 77.3 |
| GSMUA_Achr3P08720_001 | Banana | plastid | 67.37 | 69.42 |
| KRH73654 | Soybean | plastid | 62.9 | 64.26 |
| KRH14497 | Soybean | plastid | 62.66 | 63.87 |
| PGSC0003DMT400054719 | Potato | plastid | 61.48 | 61.78 |
| Solyc10g007720.2.1 | Tomato | plastid | 61.13 | 61.42 |
| Bra004269.1-P | Field mustard | plastid | 57.95 | 59.64 |
| CDY01870 | Canola | plastid | 57.95 | 59.64 |
| CDX96060 | Canola | plastid | 57.95 | 59.64 |
| GSMUA_AchrUn_... | Banana | extracellular | 17.55 | 59.36 |
| AT1G67930.1 | Thale cress | plastid | 57.01 | 58.17 |
| CDY28835 | Canola | cytosol, plastid | 57.72 | 57.31 |
| VIT_12s0028g00490.t01 | Wine grape | extracellular | 12.84 | 53.69 |
Protein Annotations
| EnsemblPlants:Zm00001d038059_P001 | EnsemblPlants:Zm00001d038059_T001 | EnsemblPlantsGene:Zm00001d038059 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0017119 |
| InterPro:Cog5 | ncoils:Coil | PANTHER:PTHR13228 | PFAM:PF10392 | ProteinID:AQK85537.1 | SEG:seg |
| UniParc:UPI0008435D66 | UniProt:A0A1D6M2X9 | MapMan:22.6.2.5 | : | : | : |
Description
Golgi transport complex protein-related
Coordinates
chr6:-:146582007..146590440
Molecular Weight (calculated)
93160.5 Da
IEP (calculated)
8.818
GRAVY (calculated)
-0.073
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTVFALSAR SRFPPPPESR STPNSPKAAP AMAAPPPTTP RLLSPTSKDL LTAASFTSPP SPTSDDPASP LDAFASDPVL SAFLSPSFSP SVFSSAALSS
101: GLAASRAEQL QDAIRLLRRH LRVEVLRRHP LLLSHLLSLR SASASLSSLP SHLNLLSSHL SLLSSHLSAP RSHLAHSSAS LSSLLATADL LLHSHRLVRL
201: SSRLLASSPA PDLARQAELY REIRLLYEEK NLSGINAVDE EMRKVDAAAS KLRSEASAVI DGGVYESNQN DVWCGLQVYY NLGELKTAVE GLVGKHKAAG
301: AKSVSVALDM KAISMTAGVG GGPGGVQRSG TPQIGGSKKA AEALWDRMRQ CMDELHRAVT AAWQLQTVLT KKRVPFTQML FLEEVWQEGE PLITERVWDA
401: IVKAFASQMK TTFTASSFVK EIFTLGYPRL FSMVENLLER ISRDTDVKGT LPALTPEGKD HMISAIEMFQ TAFLALCHSR LSDYVNSIFP MSNRGTIPSK
501: DQISRLVSRI QEEIEVVRTH GHLLVLVLRE IGKTLLLLAQ RAEYQISTGP EARQVTGTAT AAQLKNFALC LHLQEVHMRI SSVLSTLPNV ASEVLSPSLG
601: VVYGVACDSV TSLFQAMLDR LESCILKMHE QDFAGQGMDA SMDNNASAYM EELQKCAVHF RSEFLSKLLP SSSSRSETIC TIMVRRMASR VLIFFIRHAS
701: LVRPLSEAGK LRMARDMAEL ELAVGQNLFP VEQLGAPYRA LRAFRPVLFL ETSQLDKFPL LQDLPPSVIL HHLYSRGPDE LQSPLQRNKL TPLQYSLWLD
801: SQGKDQIWKG VKATLDDYEM RVRSRGDKEF SPVYPLMLQI GSSLSQPNT
101: GLAASRAEQL QDAIRLLRRH LRVEVLRRHP LLLSHLLSLR SASASLSSLP SHLNLLSSHL SLLSSHLSAP RSHLAHSSAS LSSLLATADL LLHSHRLVRL
201: SSRLLASSPA PDLARQAELY REIRLLYEEK NLSGINAVDE EMRKVDAAAS KLRSEASAVI DGGVYESNQN DVWCGLQVYY NLGELKTAVE GLVGKHKAAG
301: AKSVSVALDM KAISMTAGVG GGPGGVQRSG TPQIGGSKKA AEALWDRMRQ CMDELHRAVT AAWQLQTVLT KKRVPFTQML FLEEVWQEGE PLITERVWDA
401: IVKAFASQMK TTFTASSFVK EIFTLGYPRL FSMVENLLER ISRDTDVKGT LPALTPEGKD HMISAIEMFQ TAFLALCHSR LSDYVNSIFP MSNRGTIPSK
501: DQISRLVSRI QEEIEVVRTH GHLLVLVLRE IGKTLLLLAQ RAEYQISTGP EARQVTGTAT AAQLKNFALC LHLQEVHMRI SSVLSTLPNV ASEVLSPSLG
601: VVYGVACDSV TSLFQAMLDR LESCILKMHE QDFAGQGMDA SMDNNASAYM EELQKCAVHF RSEFLSKLLP SSSSRSETIC TIMVRRMASR VLIFFIRHAS
701: LVRPLSEAGK LRMARDMAEL ELAVGQNLFP VEQLGAPYRA LRAFRPVLFL ETSQLDKFPL LQDLPPSVIL HHLYSRGPDE LQSPLQRNKL TPLQYSLWLD
801: SQGKDQIWKG VKATLDDYEM RVRSRGDKEF SPVYPLMLQI GSSLSQPNT
001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
Arabidopsis Description
Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.