Factsheet for GSMUA_AchrUn_randomP13320_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00490.t01	Wine grape	extracellular	34.97	28.08
GSMUA_Achr3P08720_001	Banana	plastid	80.98	16.02
EES19439	Sorghum	plastid	78.53	15.63
Os05t0378900-01	Rice	plastid	77.3	15.38
TraesCS1B01G250300.1	Wheat	plastid	76.69	15.28
TraesCS1A01G233600.1	Wheat	plastid	76.69	15.28
KRH73654	Soybean	plastid	77.3	15.16
TraesCS1D01G238700.1	Wheat	plastid	76.07	15.16
KRH14497	Soybean	plastid	77.3	15.13
Zm00001d038059_P001	Maize	plastid	77.3	14.84
PGSC0003DMT400054719	Potato	plastid	76.69	14.79
Solyc10g007720.2.1	Tomato	plastid	76.69	14.79
CDY01870	Canola	plastid	71.17	14.06
AT1G67930.1	Thale cress	plastid	71.17	13.94
CDX96060	Canola	plastid	70.55	13.94
Bra004269.1-P	Field mustard	plastid	70.55	13.94
CDY28835	Canola	cytosol, plastid	70.55	13.45
HORVU1Hr1G057490.3	Barley	plastid	0.0	0.0
GSMUA_AchrUn_...	Banana	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP13320_001	EnsemblPlants:GSMUA_AchrUn_randomT13320_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG13320_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119
InterPro:Cog5	PANTHER:PTHR13228	UniParc:UPI000295CD0B	UniProt:M0U8U1	MapMan:22.6.2.5	:

Description

Putative Conserved oligomeric Golgi complex subunit 5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13320_001]

Coordinates

chrchrUn_random:+:64094846..64095337

Molecular Weight (calculated)

18231.1 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.166

Length

163 amino acids

Sequence
(BLAST)

001: MASRVLIFFI RHSALVRPLS ESGRLRVARD MAKLELTVGQ NLFPVGAPYQ ALGALRPVIF LETSQLGGSP LLKDLPSSMI LHHLSYRAPD ELQSPLQRNN
101: LTPLQNSLWL DSQGEDQIWK GIKATLDDYE IKVRARGDQE FSPVYPLMLQ ISSSLAKSTS PKY

Best Arabidopsis Sequence Match ( AT1G67930.1 )
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Arabidopsis Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.