Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- extracellular 4
- plastid 1
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P08720_001 | Banana | plastid | 86.06 | 26.21 |
| HORVU1Hr1G057490.3 | Barley | plastid | 29.08 | 21.34 |
| Os05t0378900-01 | Rice | plastid | 62.55 | 19.17 |
| TraesCS1D01G238700.1 | Wheat | plastid | 61.75 | 18.95 |
| TraesCS1B01G250300.1 | Wheat | plastid | 61.35 | 18.83 |
| TraesCS1A01G233600.1 | Wheat | plastid | 61.35 | 18.83 |
| EES19439 | Sorghum | plastid | 59.76 | 18.32 |
| Bra004269.1-P | Field mustard | plastid | 60.16 | 18.3 |
| CDX96060 | Canola | plastid | 60.16 | 18.3 |
| Solyc10g007720.2.1 | Tomato | plastid | 61.35 | 18.22 |
| KRH73654 | Soybean | plastid | 60.16 | 18.17 |
| KRH14497 | Soybean | plastid | 60.16 | 18.13 |
| PGSC0003DMT400054719 | Potato | plastid | 60.96 | 18.11 |
| AT1G67930.1 | Thale cress | plastid | 59.76 | 18.03 |
| CDY01870 | Canola | plastid | 58.96 | 17.94 |
| Zm00001d038059_P001 | Maize | plastid | 59.36 | 17.55 |
| CDY28835 | Canola | cytosol, plastid | 58.57 | 17.19 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 0.0 | 0.0 |
| VIT_12s0028g00490.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP13310_001 | EnsemblPlants:GSMUA_AchrUn_randomT13310_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG13310_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0017119 |
| InterPro:Cog5 | ncoils:Coil | PANTHER:PTHR13228 | SignalP:SignalP-noTM | UniParc:UPI000296552B | UniProt:M0U8U0 |
| MapMan:22.6.2.5 | : | : | : | : | : |
Description
Putative Conserved oligomeric Golgi complex subunit 5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13310_001]
Coordinates
chrchrUn_random:+:64089519..64092031
Molecular Weight (calculated)
27783.5 Da
IEP (calculated)
6.042
GRAVY (calculated)
-0.110
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFCMTYLI MLRDLVAGGA PDRLDLDKAA EMHREMELLY QEGNLAGISV VEDEIRWLSE TGSRLRGEAM KAVERGMDES NRNDIWCGLQ VFYNLGELRS
101: SVDTLVSKYK GAAVNNVGTA LDMKAISTSS GGFGPGGVQR SGTPQVGGGK RAAEALWERT GRCMDELHKV VTAVWHLQTV LSKKRVPFTQ VLFLHEVWQE
201: GDPLLTDQIW EALVKAFASQ MKSAFTASSF VKVAFTHGYP KLFSMIENLL E
101: SVDTLVSKYK GAAVNNVGTA LDMKAISTSS GGFGPGGVQR SGTPQVGGGK RAAEALWERT GRCMDELHKV VTAVWHLQTV LSKKRVPFTQ VLFLHEVWQE
201: GDPLLTDQIW EALVKAFASQ MKSAFTASSF VKVAFTHGYP KLFSMIENLL E
001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
Arabidopsis Description
Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.