Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g007720.2.1 | Tomato | plastid | 98.46 | 98.46 |
| VIT_12s0028g00470.t01 | Wine grape | plastid | 75.98 | 77.35 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 14.79 | 76.69 |
| KRH14497 | Soybean | plastid | 73.85 | 74.91 |
| KRH73654 | Soybean | plastid | 73.49 | 74.73 |
| Bra004269.1-P | Field mustard | plastid | 68.17 | 69.82 |
| CDY01870 | Canola | plastid | 67.93 | 69.58 |
| CDX96060 | Canola | plastid | 67.93 | 69.58 |
| GSMUA_Achr3P08720_001 | Banana | plastid | 67.81 | 69.54 |
| AT1G67930.1 | Thale cress | plastid | 68.17 | 69.23 |
| CDY28835 | Canola | cytosol, plastid | 66.86 | 66.08 |
| EES19439 | Sorghum | plastid | 62.13 | 64.1 |
| TraesCS1B01G250300.1 | Wheat | plastid | 62.01 | 64.06 |
| TraesCS1D01G238700.1 | Wheat | plastid | 61.89 | 63.94 |
| TraesCS1A01G233600.1 | Wheat | plastid | 61.78 | 63.81 |
| Os05t0378900-01 | Rice | plastid | 61.54 | 63.49 |
| Zm00001d038059_P001 | Maize | plastid | 61.78 | 61.48 |
| GSMUA_AchrUn_... | Banana | extracellular | 18.11 | 60.96 |
| VIT_05s0094g00690.t01 | Wine grape | cytosol | 8.88 | 56.82 |
| HORVU1Hr1G057490.3 | Barley | plastid | 17.04 | 42.11 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400054719 | EnsemblPlantsGene:PGSC0003DMG400021243 | EntrezGene:102600086 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 |
| GO:GO:0017119 | InterPro:Cog5 | PANTHER:PTHR13228 | PFAM:PF10392 | PGSC:PGSC0003DMG400021243 | RefSeq:XP_006360007.1 |
| SEG:seg | UniParc:UPI000294979D | UniProt:M1BWS1 | MapMan:22.6.2.5 | : | : |
Description
Golgi transport complex protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021243]
Coordinates
chr10:-:2700391..2707330
Molecular Weight (calculated)
93246.1 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.147
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPTIQRST HLSSTPTSSS SPLQRLSTFK DRSINPTPTA TVTPTPTSGL TPFTPASSPL DSFTSDPIFS SFLSSDFDST RFSSAALSSG STASRIEKLQ
101: EGLRLLDHQL RHEVLTRHHD LLNQLTSLRA AESALSTLRS SVSSLQSSLR RVRSELSDPH QVIEAKTLQL SNLHSATELL QSTIRTIRLS KKLRDLMDST
201: QDQEKLDLSK AAQLHFEILS LYNEYHLAGI DVVDLELKWV LEIGQKLRAE GMKVLEKGLE GLNQAEVGAG LQVFYNMGEL RGTVDGLVSK YKAMGVKSIT
301: TALDMKAISV GGGFGPGGVQ RSGTPQFGGS AKAKDALWQR MSGCMDQLHS IVVAVWHLQR VLSKKRDPFT HVLLLDEVMQ EGDPILTDRV WEALGKSFAN
401: QMKSTFSTSS FVKEIFTLGY PKLFSMLENL LERISRDTDV KGVPPALSSE AKDQMLSSIE IFQTAFLTLC LSRLSELVNT VFPVSSRGTV PSKDHIARII
501: SRIQEEIEAV QMDARLTLLV LREINKVLLL LSERTEYQIS AGPEARQITG PATPAQVKNF ALCQHLQEIH TRISSMVSGL PSIATDILSP ALGSIYGVAG
601: DSVTPLFQSM LDRLESCILQ IHDQNFGSLG MDAAMDNNAS PYMEELQKSI LHFRSEFLSR LLPSSSNSLT TGSETICTTL VRSMASRVLI FFIRHASLVR
701: PLSESGKLRL ARDMAELELA VGQNLFPVEQ LGAPYRALRA FRPVIFLETS QLASSPLRQD LPPSVILHHL YSRGPEELQS PLQRNRLTPM QYSLWMDSQG
801: EDQIWKGIKA TLDDYAAKVR SRGDKEFSPV YPLMIEIGSS LSGNR
101: EGLRLLDHQL RHEVLTRHHD LLNQLTSLRA AESALSTLRS SVSSLQSSLR RVRSELSDPH QVIEAKTLQL SNLHSATELL QSTIRTIRLS KKLRDLMDST
201: QDQEKLDLSK AAQLHFEILS LYNEYHLAGI DVVDLELKWV LEIGQKLRAE GMKVLEKGLE GLNQAEVGAG LQVFYNMGEL RGTVDGLVSK YKAMGVKSIT
301: TALDMKAISV GGGFGPGGVQ RSGTPQFGGS AKAKDALWQR MSGCMDQLHS IVVAVWHLQR VLSKKRDPFT HVLLLDEVMQ EGDPILTDRV WEALGKSFAN
401: QMKSTFSTSS FVKEIFTLGY PKLFSMLENL LERISRDTDV KGVPPALSSE AKDQMLSSIE IFQTAFLTLC LSRLSELVNT VFPVSSRGTV PSKDHIARII
501: SRIQEEIEAV QMDARLTLLV LREINKVLLL LSERTEYQIS AGPEARQITG PATPAQVKNF ALCQHLQEIH TRISSMVSGL PSIATDILSP ALGSIYGVAG
601: DSVTPLFQSM LDRLESCILQ IHDQNFGSLG MDAAMDNNAS PYMEELQKSI LHFRSEFLSR LLPSSSNSLT TGSETICTTL VRSMASRVLI FFIRHASLVR
701: PLSESGKLRL ARDMAELELA VGQNLFPVEQ LGAPYRALRA FRPVIFLETS QLASSPLRQD LPPSVILHHL YSRGPEELQS PLQRNRLTPM QYSLWMDSQG
801: EDQIWKGIKA TLDDYAAKVR SRGDKEFSPV YPLMIEIGSS LSGNR
001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL
Arabidopsis Description
Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.