CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73654	Soybean	plastid	97.36	97.59
VIT_12s0028g00470.t01	Wine grape	plastid	77.07	77.35
GSMUA_AchrUn_...	Banana	mitochondrion	15.13	77.3
PGSC0003DMT400054719	Potato	plastid	74.91	73.85
Bra004269.1-P	Field mustard	plastid	72.75	73.45
Solyc10g007720.2.1	Tomato	plastid	74.43	73.37
CDX96060	Canola	plastid	72.51	73.21
CDY01870	Canola	plastid	72.27	72.97
AT1G67930.1	Thale cress	plastid	71.67	71.75
CDY28835	Canola	cytosol, plastid	72.03	70.18
GSMUA_Achr3P08720_001	Banana	plastid	67.95	68.69
EES19439	Sorghum	plastid	64.35	65.45
TraesCS1B01G250300.1	Wheat	plastid	64.11	65.28
TraesCS1D01G238700.1	Wheat	plastid	63.99	65.16
TraesCS1A01G233600.1	Wheat	plastid	63.87	65.04
Os05t0378900-01	Rice	plastid	63.39	64.47
Zm00001d038059_P001	Maize	plastid	63.87	62.66
GSMUA_AchrUn_...	Banana	extracellular	18.13	60.16
VIT_05s0094g00690.t01	Wine grape	cytosol	8.64	54.55
HORVU1Hr1G057490.3	Barley	plastid	18.61	45.32

Protein Annotations

EMBL:ACUP02008504	EnsemblPlants:KRH14497	EnsemblPlantsGene:GLYMA_14G029500	EntrezGene:100806353	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150
GO:GO:0017119	InterPro:Cog5	ncoils:Coil	PANTHER:PTHR13228	PFAM:PF10392	ProteinID:KRH14497
ProteinID:KRH14497.1	SEG:seg	UniParc:UPI000233AE5B	UniProt:I1M6Y5	MapMan:22.6.2.5	:

Description

hypothetical protein

Coordinates

chr14:+:2150450..2155697

Molecular Weight (calculated)

91444.0 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.106

Length

833 amino acids

Sequence
(BLAST)

001: MASPAAARTP VSTGASPMQR LSTFKNPSSA AASTATTTPS SSALDSLASD PIFSAFLSPS FSSTSFSSAA LSSGSPASTA EKLHHAIRLL ENQLRSEVLS
101: RHHDLLSQLS SLHHADHALS TLRSALSSLQ SSVRRLRSEL SDPHRSVAAK TAQLSNLHRT TELLQHSIRA LRLSKKLRDL MAAADPEKLD LAKAAQLHFE
201: ILSLCDEYDL VGIDAVDEEL NWVRETGDLL RSEAMKVLER GMEGLNQAEV GTGLQVFYNL GELKGTVEQV VNKYKGLGAK SVTVALDMKT ISGGSGYGPG
301: GIRGSGTPHI GGGAKAREAL WHRLGNCMDQ LHSIAVAVWH LQRVLSKKRD PFTHVLLLDE VIQEGDPMLT DRVWEAITKA FASQMKSAFT GSSFVKEIFT
401: MGYPKLYSMI ENLLERISHD TDIKGVLPAI NLSGKEQIIS AVEIFQNAFL AHCLSRLSDL VNSVFPMSSR GSVPSKEQIS RIISRIQEEI ETVQMDARLT
501: LLVLREIGKV LILLAERAEY QISTGPESRQ VNGPATPAQL KNFTLCQHLQ DVHTRISSIL KGMPSIAADV LSASLGVIYG VACDSVTALF QAMLDRLESC
601: ILQIHDHNFG VLGMDAAMDN NASPYMEELQ KCILHFRSEF LSRLLPSRNS TAPGTENICT RLVQSMASRV LVFFIRHASL VRPLSESGKL RMARDMAELE
701: LAVGQNLFPV EQLGAPYRAL RAFRPLIFLE TSQLASSPLL QDLPPNVILH HLYTRAPEEL QSPLQRNKLT PLQYSLWLDS QWEDQIWKGI KATLDDYAAN
801: VRSRGDKEFS PVYPLMLQLG SSLIEKDQTS SKS

Best Arabidopsis Sequence Match ( AT1G67930.1 )
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Arabidopsis Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.