Factsheet for HORVU1Hr1G057490.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G238700.1	Wheat	plastid	87.72	36.67
TraesCS1B01G250300.1	Wheat	plastid	87.43	36.55
TraesCS1A01G233600.1	Wheat	plastid	86.84	36.31
Os05t0378900-01	Rice	plastid	82.46	34.43
EES19439	Sorghum	plastid	81.58	34.07
Zm00001d038059_P001	Maize	plastid	80.7	32.51
GSMUA_AchrUn_...	Banana	extracellular	21.34	29.08
GSMUA_Achr3P08720_001	Banana	plastid	47.37	19.66
KRH73654	Soybean	plastid	45.91	18.89
KRH14497	Soybean	plastid	45.32	18.61
CDY01870	Canola	plastid	42.98	17.82
CDX96060	Canola	plastid	42.69	17.7
Bra004269.1-P	Field mustard	plastid	42.69	17.7
AT1G67930.1	Thale cress	plastid	41.52	17.07
PGSC0003DMT400054719	Potato	plastid	42.11	17.04
Solyc10g007720.2.1	Tomato	plastid	42.11	17.04
CDY28835	Canola	cytosol, plastid	41.81	16.73
GSMUA_AchrUn_...	Banana	mitochondrion	0.0	0.0
VIT_12s0028g00490.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G057490.3	EnsemblPlantsGene:HORVU1Hr1G057490	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119	InterPro:Cog5
ncoils:Coil	PANTHER:PTHR13228	PFAM:PF10392	SEG:seg	MapMan:22.6.2.5	:

Description

No Description!

Coordinates

chrchr1H:+:419501164..419502324

Molecular Weight (calculated)

32319.7 Da

IEP (calculated)

9.259

GRAVY (calculated)

0.041

Length

342 amino acids

Sequence
(BLAST)

001: TAMAAPATPR LLLSPTSKDL ITGSSFASPP SPTSSSPDPA SPLDAFASDP VLSAFLSPSF SPSDFSSAAL SSGLAASRAE QLQDAIRLLR RHLRAEVLRR
101: HPLLLSHLLS LRSASASLSS LPSNLRLLFS HLSLLSSHLS APRSHLALSS SSLSSLLSTA DLLLHSHRLV RLSSRLLASS PAPDLARQAE LHREIRLLYE
201: EKNLSGINAV DEEMRKVDAA ASKLRSEASA VIDRGIAESN QNDIWCGLQV YYNLGELKPA VEGLVGKCKA AGAKSVSVAL DMKAISMAGG GGGPGGVQRS
301: GTXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXICSE FI

Best Arabidopsis Sequence Match ( AT1G67930.1 )
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Arabidopsis Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.