Factsheet for Os05t0378900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G238700.1	Wheat	plastid	90.48	90.59
TraesCS1B01G250300.1	Wheat	plastid	90.48	90.59
TraesCS1A01G233600.1	Wheat	plastid	90.23	90.34
EES19439	Sorghum	plastid	90.11	90.11
Zm00001d038059_P001	Maize	plastid	88.64	85.51
HORVU1Hr1G057490.3	Barley	plastid	34.43	82.46
GSMUA_AchrUn_...	Banana	mitochondrion	15.38	77.3
GSMUA_Achr3P08720_001	Banana	plastid	67.89	67.48
KRH73654	Soybean	plastid	64.71	63.78
KRH14497	Soybean	plastid	64.47	63.39
GSMUA_AchrUn_...	Banana	extracellular	19.17	62.55
PGSC0003DMT400054719	Potato	plastid	63.49	61.54
Solyc10g007720.2.1	Tomato	plastid	63.49	61.54
CDY01870	Canola	plastid	60.44	60.0
CDX96060	Canola	plastid	60.44	60.0
Bra004269.1-P	Field mustard	plastid	60.44	60.0
AT1G67930.1	Thale cress	plastid	59.58	58.65
CDY28835	Canola	cytosol, plastid	59.83	57.31
VIT_12s0028g00490.t01	Wine grape	extracellular	12.45	50.25

Protein Annotations

MapMan:22.6.2.5	EntrezGene:4338625	ProteinID:AAU43946.1	EMBL:AK103841	ProteinID:BAF17304.1	ProteinID:BAS93747.1
ProteinID:BAS93748.1	InterPro:Cog5	ncoils:Coil	ProteinID:EEE63536.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150
GO:GO:0017119	EnsemblPlantsGene:Os05g0378900	EnsemblPlants:Os05t0378900-01	PFAM:PF10392	PANTHER:PTHR13228	UniProt:Q65XH1
UniParc:UPI000043F42B	RefSeq:XP_015640282.1	SEG:seg	:	:	:

Description

Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)

Coordinates

chr5:-:18319332..18323976

Molecular Weight (calculated)

89881.7 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.067

Length

819 amino acids

Sequence
(BLAST)

001: MAAPATPRLL LSPTSKDLIA AASSSFPSPP SPTTSSDPAS PLDAFASDPV LSAFLSPSFS PSDFSSAALS SGLAASRAEQ LQEAIRLLRR HLRAEVLRRH
101: PLLLSHLLSL RSASASLSSL PSHLHLLSSH LSLLSSHLSA PRAHLAHSSS SLSTLLSTAD LLLHSHRLVR LSSRLLTSTP PPDLARQAEL HREIRLLYEE
201: KNLAGINAVD EEMRKVDAAA SKLRSEASAV IDRGIAESNQ NDVWCGLQVY YNLGELKPAV EGLVAKYKAA GAKSVAVALD MKAISMAAGG GGGPGGVQRS
301: GTPQIGGSKK AAEALWDRMR QCMEELHRSV TAAWQLQTVL TKKRVPFTQM LFLEEVWQEG DPLLTERVWD AIVKAFASQL KSAFTASSFV KEIFTLGYPR
401: LFSMIENLLE RILRDTDVKG TLPALTPVGK NHMTAAIEIF QTAFLALCHS RLSDYINSIF PMSGRGIPSK DQISRLISRI QEEVEVVRTH GHLLARVLQE
501: IGKVLLLLAQ RAEYQISTGT EARQVTGTVT PAQLKNFALC LHLQDVHTRI SSIVSTLPNV TSEKLSKSLE AIYTVACDSV SPLFKEMFDR LGSCILKMHE
601: QDFGTHGMDA TMDNNASAYM EELQKCAVHF RSEFLSKLLP SSSSRSETIC TIMVRSMASR VLILFIRHAS LVRPLSEAGK LRMTRDMAEL ELAVGQNLFP
701: VEQLGAPYRA LRAFRPVLFL ETSQLEKSPL LQDLPPSVIL HHLYSRGPDE LQSPLQRNKL TPLQYSLWLD SQGEDQIWKG VKATLDDYEM KVRSRGDKEF
801: SPVYPLMLQI GSALSQAKG

Best Arabidopsis Sequence Match ( AT1G67930.1 )
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Arabidopsis Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.