Factsheet for AT1G67930.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96060	Canola	plastid	90.02	90.79
Bra004269.1-P	Field mustard	plastid	89.78	90.55
CDY01870	Canola	plastid	89.42	90.18
CDY28835	Canola	cytosol, plastid	88.1	85.73
KRH73654	Soybean	plastid	71.75	71.84
KRH14497	Soybean	plastid	71.75	71.67
GSMUA_AchrUn_...	Banana	mitochondrion	13.94	71.17
VIT_12s0028g00470.t01	Wine grape	plastid	70.79	70.96
PGSC0003DMT400054719	Potato	plastid	69.23	68.17
Solyc10g007720.2.1	Tomato	plastid	69.11	68.05
GSMUA_Achr3P08720_001	Banana	plastid	64.54	65.17
TraesCS1A01G233600.1	Wheat	plastid	59.13	60.15
TraesCS1B01G250300.1	Wheat	plastid	59.01	60.02
TraesCS1D01G238700.1	Wheat	plastid	58.89	59.9
GSMUA_AchrUn_...	Banana	extracellular	18.03	59.76
Os05t0378900-01	Rice	plastid	58.65	59.58
EES19439	Sorghum	plastid	58.53	59.46
Zm00001d038059_P001	Maize	plastid	58.17	57.01
VIT_05s0094g00690.t01	Wine grape	cytosol	8.41	53.03
HORVU1Hr1G057490.3	Barley	plastid	17.07	41.52

Protein Annotations

MapMan:22.6.2.5	EntrezGene:843121	ProteinID:AAG52007.1	ProteinID:AEE34723.1	ArrayExpress:AT1G67930	EnsemblPlantsGene:AT1G67930
RefSeq:AT1G67930	TAIR:AT1G67930	RefSeq:AT1G67930-TAIR-G	EnsemblPlants:AT1G67930.1	TAIR:AT1G67930.1	Unigene:At.19367
InterPro:Cog5	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005829	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119	RefSeq:NP_176960.1
PFAM:PF10392	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR13228	UniProt:Q9C9V9	UniParc:UPI00000A90F4	SEG:seg

Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]

Coordinates

chr1:-:25474140..25477545

Molecular Weight (calculated)

91656.3 Da

IEP (calculated)

7.453

GRAVY (calculated)

-0.152

Length

832 amino acids

Sequence
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.