Factsheet for VIT_05s0094g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00470.t01	Wine grape	plastid	67.42	10.72
KRH73654	Soybean	plastid	56.82	9.03
PGSC0003DMT400054719	Potato	plastid	56.82	8.88
Solyc10g007720.2.1	Tomato	plastid	56.82	8.88
KRH14497	Soybean	plastid	54.55	8.64
Bra004269.1-P	Field mustard	plastid	53.03	8.48
CDX96060	Canola	plastid	53.03	8.48
CDY01870	Canola	plastid	53.03	8.48
AT1G67930.1	Thale cress	plastid	53.03	8.41
CDY28835	Canola	cytosol, plastid	52.27	8.07
VIT_12s0028g00490.t01	Wine grape	extracellular	2.27	1.48

Protein Annotations

ArrayExpress:VIT_05s0094g00690	EMBL:FN595507	EnsemblPlants:VIT_05s0094g00690.t01	EnsemblPlantsGene:VIT_05s0094g00690	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150
GO:GO:0017119	InterPro:Cog5	PANTHER:PTHR13228	ProteinID:CCB49390	ProteinID:CCB49390.1	UniParc:UPI00021095BA
UniProt:F6HB21	MapMan:22.6.2.5	:	:	:	:

Description

No Description!

Coordinates

chr5:+:24035930..24039139

Molecular Weight (calculated)

15023.8 Da

IEP (calculated)

10.409

GRAVY (calculated)

0.163

Length

132 amino acids

Sequence
(BLAST)

001: MEREINQLAF YYVLLERIFH DTKVKEVLSV IGSERRDQMI AAIEIFQTSF LALCLGLPSD LVNVVFPVLR RGSVPSKGHI AGIISRIQEE VKAIQLDGHL
101: TLRVIREIGK ALLLLEQKKL NTRHLLVPKR AK

Best Arabidopsis Sequence Match ( AT1G67930.1 )
(BLAST)

001: MALPPSSPSP SSPSLQRLST FKNPPPSSLS SGAPPPQTPS SSSSSPLDSF ATDPILSPFL SSSFSSASFS SAALASGSPA STAERLHQAI RLLDSQLRND
101: VISRHPELLA QLSSLSHADV SLSSLRSSVS SLQSSIRRVR SDLSEPIKSI RSKSVQLSNL HTATELLSHS VRTLRLSKKL RDLADFPDPD KIDLTKAAQF
201: HFEILTMCKE YDLFGIDVID EEIKFVTEIG EKLRSEAMKV LERGMEGLNQ AEVGTGLQVF YNLGELKSTV DQLVNKYKGM AVKSVSVAMD MKAITSGSGG
301: GFGPGGIRSS GSPHIGGGAK VREALWQRMA SCMEQLCSLV VAVWHLQRVL SKKRDPFTHV LLLDEVIKEG DSMLTDRVWD ALVKAFTSQM KSAYTASSFV
401: KEIFTMGYPK LVSMIENLLE RISRDTDVKG VLPAINLERK EQMVACIAIF QTAFLSLCFG RLSDLVNSIF PMSSRGSLPS KEQISQVLSH IQDEIEAVHP
501: DARLTLLVLR EIGKALSNLA QRAECQISTG PETRQISGPA TSTQIRNFTL CQHLQGIHTH ISSMVADLPS IATDVLSPYL AAIYDAACEP VTPLFKAMRD
601: KLESCILQIH DQNFGADDAD MDNNASSYME ELQRSILHFR KEFLSRLLPS AANANTAGTE SICTRLTRQM ASRVLIFYIR HASLVRPLSE WGKLRMAKDM
701: AELELAVGQN LFPVEQLGAP YRALRAFRPL VFLETSQMGS SPLINDLPPS IVLHHLYTRG PDELESPMQK NRLSPKQYSL WLDNQREDQI WKGIKATLDD
801: YAVKIRSRGD KEFSPVYPLM LQIGSSLTQE NL

Arabidopsis Description

Golgi transport complex protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.