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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 6
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
Predotar:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400001512
PGSC0003DMT400001564
PGSC0003DMT400001702
PGSC0003DMT400003012
PGSC0003DMT400005245
PGSC0003DMT400010896
PGSC0003DMT400011181
PGSC0003DMT400013995
PGSC0003DMT400017754
PGSC0003DMT400022642
PGSC0003DMT400025666
PGSC0003DMT400029834
PGSC0003DMT400030435
PGSC0003DMT400030470
PGSC0003DMT400033284
PGSC0003DMT400041811
PGSC0003DMT400042222
PGSC0003DMT400042962
PGSC0003DMT400043286
PGSC0003DMT400044120
PGSC0003DMT400045408
PGSC0003DMT400046936
PGSC0003DMT400054719
PGSC0003DMT400061066
PGSC0003DMT400062098
PGSC0003DMT400063336
PGSC0003DMT400068480
PGSC0003DMT400069221
PGSC0003DMT400071616
PGSC0003DMT400072569
PGSC0003DMT400072932
PGSC0003DMT400073364
PGSC0003DMT400074656
PGSC0003DMT400075665
PGSC0003DMT400077751
PGSC0003DMT400079119
PGSC0003DMT400079259
PGSC0003DMT400081953
PGSC0003DMT400093802

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57460.1 PGSC0003DMT400001702 AT1G15370.1 24529374
AT5G57460.1 PGSC0003DMT400073364 AT1G15370.1 24529374
AT5G57460.1 PGSC0003DMT400025666 AT1G20760.1 24529374
AT5G57460.1 PGSC0003DMT400010896 AT1G63250.1 24529374
AT5G57460.1 PGSC0003DMT400093802 AT1G64190.1 24529374
AT5G57460.1 PGSC0003DMT400054719 AT1G67930.1 24529374
AT5G57460.1 PGSC0003DMT400011181 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400013995 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400029834 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400030470 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400033284 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400071616 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400079119 AT1G76810.1 24529374
AT5G57460.1 PGSC0003DMT400072932 AT2G03510.1 24529374
AT5G57460.1 PGSC0003DMT400061066 AT2G17390.1 24529374
AT5G57460.1 PGSC0003DMT400062098 AT2G17390.1 24529374
AT5G57460.1 PGSC0003DMT400063336 AT2G33040.1 24529374
AT5G57460.1 PGSC0003DMT400022642 AT2G40730.1 24529374
AT5G57460.1 PGSC0003DMT400030435 AT2G40730.1 24529374
AT5G57460.1 PGSC0003DMT400042962 AT2G40730.1 24529374
AT5G57460.1 PGSC0003DMT400075665 AT2G43950.1 24529374
AT5G57460.1 PGSC0003DMT400005245 AT3G01280.1 24529374
AT5G57460.1 PGSC0003DMT400017754 AT3G01280.1 24529374
AT5G57460.1 PGSC0003DMT400042222 AT3G11630.1 24529374
AT5G57460.1 PGSC0003DMT400072569 AT3G11630.1 24529374
AT5G57460.1 PGSC0003DMT400003012 AT3G16810.1 24529374
AT5G57460.1 PGSC0003DMT400068480 AT4G18480.1 24529374
AT5G57460.1 PGSC0003DMT400044120 AT4G22690.1 24529374
AT5G57460.1 PGSC0003DMT400077751 AT5G01380.1 24529374
AT5G57460.1 PGSC0003DMT400081953 AT5G19760.1 24529374
AT5G57460.1 PGSC0003DMT400046936 AT5G24710.1 24529374
AT5G57460.1 PGSC0003DMT400041811 AT5G40770.1 24529374
AT5G57460.1 PGSC0003DMT400043286 AT5G40770.1 24529374
AT5G57460.1 PGSC0003DMT400074656 AT5G40770.1 24529374
AT5G57460.1 PGSC0003DMT400079259 AT5G45390.1 24529374
AT5G57460.1 PGSC0003DMT400045408 AT5G51430.1 24529374
AT5G57460.1 PGSC0003DMT400001564 AT5G54100.1 24529374
AT5G57460.1 PGSC0003DMT400069221 AT5G54100.1 24529374
AT5G57460.1 PGSC0003DMT400001512 AT5G54160.1 24529374
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g078790.1.1 Tomato nucleus 97.32 97.32
KRG90331 Soybean endoplasmic reticulum 69.61 70.16
VIT_11s0052g00920.t01 Wine grape mitochondrion 67.87 69.4
KRH02873 Soybean endoplasmic reticulum, nucleus 68.82 69.37
Bra002727.1-P Field mustard plastid 66.77 66.25
CDY11868 Canola plastid 66.77 65.94
CDX88623 Canola plastid 66.46 65.83
Bra006819.1-P Field mustard plastid 66.46 65.63
CDY38299 Canola plastid 66.46 65.63
CDY25907 Canola plastid 66.3 65.27
AT5G57460.1 Thale cress cytosol 65.98 64.86
GSMUA_Achr3P27960_001 Banana plastid 60.31 58.47
HORVU2Hr1G002480.5 Barley cytosol 37.64 55.97
EES14778 Sorghum plastid 56.06 55.89
Zm00001d024416_P001 Maize plasma membrane 55.43 55.26
TraesCS2B01G003600.1 Wheat plastid 54.49 54.83
TraesCS2A01G014200.1 Wheat plastid 54.8 54.8
TraesCS2D01G014900.1 Wheat plastid 54.96 54.79
Os08t0243900-01 Rice plasma membrane, plastid 55.28 54.76
HORVU2Hr1G002410.2 Barley plastid 55.59 51.23
Protein Annotations
EnsemblPlants:PGSC0003DMT400029685EnsemblPlantsGene:PGSC0003DMG400011415EntrezGene:102604479GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005886GO:GO:0009507GO:GO:0009536GO:GO:0016020InterPro:IPR028565
InterPro:MHDInterPro:Muniscin_CPANTHER:PTHR37769PFAM:PF10291PFscan:PS51072PGSC:PGSC0003DMG400011415
RefSeq:XP_006362224.1SEG:segUniParc:UPI000295C2F6UniProt:M1AT97MapMan:22.1.4.2:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011415]
Coordinates
chr10:-:58925892..58928315
Molecular Weight (calculated)
69015.3 Da
IEP (calculated)
4.686
GRAVY (calculated)
-0.177
Length
635 amino acids
Sequence
(BLAST)
001: MSCLALSLQP TNGPDILLQT REWFPPSRAL MALSAFRQTR LAFSKQPQQT TADSYPSDPS MSLGDDPLAA SSGQVIVGVE SRYRVVYRLV NSIYVLAITT
101: ADDNDKDMVV NNVFECISIV NQAVSVVVTA CRGVDVTPEK LAKKYAEIYM ALDIVLRGVS NIRLAAMLAS MHGESIAKMV HSAVHTENKI RGGDSWVNVE
201: AHSLEQEGGL ETFSKALFEL PQETLEAGDE VAATLAITGG EKEEEKIEEI EVEQDPFAAS DKINQPESLM GGFKKDKANE SSDVAKALAG LDVTTLPPAA
301: ASQSTHIGVE GFEGEYGGIE FSNEGSTLRE DFEGINDAWG GGLDASEYVG TKKVKKDQGL GGLELLATSE PPKAAAGATA EGAGKNLEDI LVKKMNGPEM
401: FITEEISAEF RESLLARVGL MGIVYLRTLP PKSSDDNETE FSFKVEDTAA VKRFVMQNSR VSSLGNGLFH VKTAPSNEPI PIIKYSLLPR LTPLPLRIRL
501: VKRLSGTLLS VMLQYVANPD IPVPLTNVTF VLKLPVDPTL LKVSPKAVLN RSERELKWHV DEIPLKGHPG KLKARFPIDI NDDDEAVELE LFGYVKFSSQ
601: GTRSLSGISL QPALEGKTDF YEVDHRYSSG VYTCN
Best Arabidopsis Sequence Match ( AT5G57460.1 )
(BLAST)
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.