Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002727.1-P | Field mustard | plastid | 97.2 | 97.66 |
| CDY25907 | Canola | plastid | 95.96 | 95.66 |
| CDX88623 | Canola | plastid | 88.49 | 88.77 |
| CDY11868 | Canola | plastid | 88.49 | 88.49 |
| AT5G57460.1 | Thale cress | cytosol | 88.02 | 87.62 |
| KRG90331 | Soybean | endoplasmic reticulum | 69.83 | 71.27 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 69.52 | 70.95 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 65.94 | 68.28 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 65.63 | 66.46 |
| Solyc10g078790.1.1 | Tomato | nucleus | 65.47 | 66.3 |
| GSMUA_Achr3P27960_001 | Banana | plastid | 59.25 | 58.17 |
| EES14778 | Sorghum | plastid | 54.59 | 55.1 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 36.39 | 54.8 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 54.59 | 54.76 |
| TraesCS2B01G003600.1 | Wheat | plastid | 53.34 | 54.36 |
| TraesCS2D01G014900.1 | Wheat | plastid | 53.5 | 54.0 |
| Zm00001d024416_P001 | Maize | plasma membrane | 53.5 | 54.0 |
| TraesCS2A01G014200.1 | Wheat | plastid | 53.03 | 53.7 |
| HORVU2Hr1G002410.2 | Barley | plastid | 53.34 | 49.78 |
Protein Annotations
| EnsemblPlants:CDY38299 | EnsemblPlantsGene:GSBRNA2T00065666001 | InterPro:IPR028565 | InterPro:MHD | InterPro:Muniscin_C | PANTHER:PTHR37769 |
| PFAM:PF10291 | PFscan:PS51072 | ProteinID:CDY38299 | ProteinID:CDY38299.1 | SEG:seg | UniParc:UPI0004EEA4A4 |
| UniProt:A0A078HLR1 | MapMan:22.1.4.2 | : | : | : | : |
Description
BnaA10g11470DBnaA10g11470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLR1]
Coordinates
chrLK032420:+:327822..329753
Molecular Weight (calculated)
69994.4 Da
IEP (calculated)
4.968
GRAVY (calculated)
-0.244
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCLALALQP SNGSDILLQT REWFPPARAL IALSFFRQTR QAFSPAKHPH SNPKQKQPPS SSSSAADPDD TTAAEFVGDD PLAASNGQVI VGVESKYRVV
101: YRLVNSIYIL GVTVADHDDN SINVFECIHI VNQAVSVIVT ACRGVDVTPE KLGRKYAEVY MALDIVLRGV SNIRLAAMLG SMHGDGIAKM VHSALDTENK
201: IRGGGSWASV ESHAAEHLAS VQAFSSARFE LPLETLSSGD EMAASLAPVV VQESEELKEE MEETESLDPF AASETVNKEK ELVGGFKKTK DASSKDLTLA
301: LAGLEVTTLP PAEATQSTHI NVEGFEGEYG GIEFSNEQAS IGETFESFSD AWGGGLDPSE FMGPKKIHKK EGLGGLELLH TSDPKGVEGK DGGNVDNLVK
401: KPEMKGPEMY ISEEIRTEFR ESLLARVGLM GVVYLKTMPP KGSGEEKDTE FSFRVEGTSP VKRFAMQSSR VSSLGNGLFH VRTALSEEPI PILKYSLQPK
501: LTPLPLRVRM VKRVSGTLLS LMIQYVSSPE LPQPLKNVDF VLKLPVDPTL LKVSPKAILN RTDRELKWQV SEIPLTGSPG RLRARMPLDS ENSEEEPEII
601: CYVKFSVQGS SSLSGITLRA AAEGNTDFYE VDHRFETGVY MCN
101: YRLVNSIYIL GVTVADHDDN SINVFECIHI VNQAVSVIVT ACRGVDVTPE KLGRKYAEVY MALDIVLRGV SNIRLAAMLG SMHGDGIAKM VHSALDTENK
201: IRGGGSWASV ESHAAEHLAS VQAFSSARFE LPLETLSSGD EMAASLAPVV VQESEELKEE MEETESLDPF AASETVNKEK ELVGGFKKTK DASSKDLTLA
301: LAGLEVTTLP PAEATQSTHI NVEGFEGEYG GIEFSNEQAS IGETFESFSD AWGGGLDPSE FMGPKKIHKK EGLGGLELLH TSDPKGVEGK DGGNVDNLVK
401: KPEMKGPEMY ISEEIRTEFR ESLLARVGLM GVVYLKTMPP KGSGEEKDTE FSFRVEGTSP VKRFAMQSSR VSSLGNGLFH VRTALSEEPI PILKYSLQPK
501: LTPLPLRVRM VKRVSGTLLS LMIQYVSSPE LPQPLKNVDF VLKLPVDPTL LKVSPKAILN RTDRELKWQV SEIPLTGSPG RLRARMPLDS ENSEEEPEII
601: CYVKFSVQGS SSLSGITLRA AAEGNTDFYE VDHRFETGVY MCN
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.