CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.87	28.35
Bra027685.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	96.48	28.13
CDY25568	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	96.48	28.13
AT1G64190.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	94.37	27.52
CDY39725	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	93.66	27.31
CDY44457	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	93.66	27.31
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	85.92	24.7
KRH60004	Soybean	cytosol	83.1	24.63
KRH41276	Soybean	nucleus	83.1	23.84
GSMUA_Achr3P16150_001	Banana	mitochondrion	77.46	23.4
CDY43238	Canola	mitochondrion	66.2	23.33
CDY57527	Canola	mitochondrion	66.2	23.27
CDY34724	Canola	mitochondrion	66.2	23.27
PGSC0003DMT400093802	Potato	cytosol	80.28	23.03
Solyc12g056120.1.1	Tomato	plastid	78.87	22.58
TraesCS1D01G361400.1	Wheat	cytosol, mitochondrion, plastid	72.54	21.55
EES08484	Sorghum	plastid	74.65	21.03
Os11t0484500-01	Rice	plastid	74.65	20.87
TraesCS1A01G357200.1	Wheat	unclear	72.54	20.56
TraesCS1B01G373600.1	Wheat	plastid	72.54	20.56
Zm00001d049187_P001	Maize	plastid	73.24	20.51
HORVU1Hr1G080480.1	Barley	plastid	71.83	17.44
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	8.45	7.79
CDY34406	Canola	extracellular	1.41	1.69

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	MapMan:35.1	InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C
InterPro:6PGD_dom2	GO:A0A078H786	UniProt:A0A078H786	EnsemblPlants:CDY34405	ProteinID:CDY34405	ProteinID:CDY34405.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056471001	InterPro:IPR013328
PFAM:PF00393	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	SMART:SM01350	SUPFAM:SSF48179	UniPathway:UPA00115
UniParc:UPI0004EEC84B	:	:	:	:	:

Description

BnaA09g11470DBnaA09g11470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H786]

Coordinates

chrLK032333:-:307207..308207

Molecular Weight (calculated)

15517.2 Da

IEP (calculated)

4.271

GRAVY (calculated)

-0.338

Length

142 amino acids

Sequence
(BLAST)

001: MVHNGIEYGD MQLISEAYDV LKNVGGLSNE ELAEIFTEWN RGELESFLVE ITSDIFRVKD EFGDGELVDK ILDKTGMKGT GKWTVQQAAE LSVAAPTIAA
101: SLDCRYLSGL KDERENAAKV LREAGLKEEI GSASSGIDKK SN

Best Arabidopsis Sequence Match ( AT1G64190.1 )
(BLAST)

001: MESAALSRIG LAGLAVMGQN LALNIAEKGF PISVYNRTTS KVDETLDRAA VEGNLPVSGQ YSPRDFVLSI QRPRSLIILV KAGAPVDQTI DAFSEYMEPG
101: DCIIDGGNEW YQNTERRISE AEQKGLLYLG MGVSGGEEGA RNGPSLMPGG SFQAYDNIKD ILEKVAAQVE DGPCVTYIGE GGSGNFVKMV HNGIEYGDMQ
201: LISEAYDVLK NVGGLSNEEL AEIFTEWNSG ELESFLVEIT SDIFRVKDEF GDGELVDKIL DKTGMKGTGK WTVQQAAELS VAAPTIAASL DCRYLSGLKD
301: ERENAAKVLR EAGLKEEIGS ASSGIDKKRL VDDVRQALYA SKICSYAQGM NLLRAKSLEK SWNLNFGELA RIWKGGCIIR AVFLDRIKKA YQRNPDLASL
401: VVDPEFAKEM VQRQAAWRRV VGLAVSAGIS TPGMCASLAY FDTYRRARLP ANLVQAQRDL FGAHTYERTD RPGAYHTEWT KLARKNH

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SH69]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.