CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41670.1	EES09373	AT1G35670.1	19130088
AT5G41670.1	EES16732	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049187_P001	Maize	plastid	94.25	93.69
Os11t0484500-01	Rice	plastid	92.46	91.73
TraesCS1D01G361400.1	Wheat	cytosol, mitochondrion, plastid	86.71	91.42
TraesCS1B01G373600.1	Wheat	plastid	90.87	91.42
TraesCS1A01G357200.1	Wheat	unclear	90.87	91.42
HORVU1Hr1G080480.1	Barley	plastid	90.28	77.78
GSMUA_Achr3P16150_001	Banana	mitochondrion	71.23	76.38
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.72	76.2
CDY39725	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.21	75.77
CDY44457	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.21	75.77
AT5G41670.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.02	75.56
Bra027685.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.02	75.56
Bra025480.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.02	75.56
CDY25568	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.82	75.36
AT1G64190.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.82	75.36
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	73.61	75.1
KRH60004	Soybean	cytosol	71.23	74.95
KRH41276	Soybean	nucleus	73.41	74.75
CDY34405	Canola	cytosol	21.03	74.65
Solyc12g056120.1.1	Tomato	plastid	72.42	73.59
PGSC0003DMT400093802	Potato	cytosol	72.22	73.54
OQU75707	Sorghum	mitochondrion	66.07	69.23
CDY34406	Canola	extracellular	15.48	66.1
KXG34080	Sorghum	peroxisome	34.33	65.53

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	EntrezGene:8075790
UniProt:C5Y2F0	EnsemblPlants:EES08484	ProteinID:EES08484	ProteinID:EES08484.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0005975	GO:GO:0006098	GO:GO:0006139
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009414	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016491	GO:GO:0019521
GO:GO:0050661	GO:GO:0055114	InterPro:IPR013328	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393	PFAM:PF03446
PIRSF:PIRSF000109	PRINTS:PR00076	PANTHER:PTHR11811	PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350
EnsemblPlantsGene:SORBI_3005G115600	SUPFAM:SSF48179	SUPFAM:SSF51735	unigene:Sbi.10635	TIGRFAMs:TIGR00873	UniParc:UPI0001A8665B
RefSeq:XP_002449496.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:50615554..50627848

Molecular Weight (calculated)

54090.6 Da

IEP (calculated)

6.289

GRAVY (calculated)

-0.113

Length

504 amino acids

Sequence
(BLAST)

001: MASPAPASPA AAAAHAPAPR IGLAGLATMG QNLALNIAEK GFPISVYNRT AAKVDSTLSR ARDEGALPVL GHRDPRGFVL SLARPRTVVL LVQAGPAVDA
101: TIQALTPYLE PGDAIVDGGN EWYQNTERRI EEAAARGILY LGMGVSGGEE GARNGPSLMP GGHVDAYNNI RDILEKAAAQ TEDGACVTFV GPGGAGNFVK
201: MVHNGIEYGD MQLIAEAYDV LRRVGGLSNS EIADVFAEWN KGELESFLVE ITADIFTVAD PLEGSGGALV DKILDKTGMK GTGKWTVQQA AELAVAAPTI
301: AASLDGRYLS GLKDERVAAA GVLEEEGMPA GLLETINVDK KVLVDRVRQA LYASKICSYA QGMNLLRAKS VEKGWNLNLA ELARIWKGGC IIRARFLDRI
401: KRAYDRNPEL ANLIVDRDFA REMVQRQNAW RWVVARAVEA GISTPGMTAS LSYFDTYRSS RLPANLIQAQ RDLFGAHTYE RIDCPGSFHT EWTKLARRSN
501: GAAI

Best Arabidopsis Sequence Match ( AT5G41670.2 )
(BLAST)

001: MESVALSRIG LAGLAVMGQN LALNIADKGF PISVYNRTTS KVDETLDRAS NEGKLPVAGQ YSPRDFVLSI QRPRSVIILV KAGAPVDQTI SALSEYMEPG
101: DCIIDGGNEW YQNTERRIVE AEKKGLLYLG MGVSGGEEGA RNGPSLMPGG SFTAYNNVKD ILEKVAAQVE DGPCVTYIGE GGSGNFVKMV HNGIEYGDMQ
201: LISEAYDVLK NVGGLSNDEL AEIFTEWNRG ELESFLVEIT SDIFRVKDDY GDGELVDKIL DKTGMKGTGK WTVQQAAELS VAAPTIAASL DCRYLSGLKD
301: ERENAAKVLE EAGLKEDIGS ASRGVDKKRL IDDVRQALYA SKICSYAQGM NLLRAKSLEK GWDLNLGEMA RIWKGGCIIR AVFLDRIKKA YQRNPNLASL
401: VVDPDFAKEM VQRQAAWRRV VGLAISAGIS TPGMCASLAY FDTYRRARLP ANLVQAQRDL FGAHTYERTD RPGAYHTEWT KLARKSQ

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178UQL8]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.