Factsheet for HORVU1Hr1G080480.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41670.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT5G41670.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G373600.1	Wheat	plastid	83.42	97.41
TraesCS1A01G357200.1	Wheat	unclear	83.42	97.41
TraesCS1D01G361400.1	Wheat	cytosol, mitochondrion, plastid	78.63	96.23
EES08484	Sorghum	plastid	77.78	90.28
Os11t0484500-01	Rice	plastid	76.92	88.58
Zm00001d049187_P001	Maize	plastid	76.58	88.36
GSMUA_Achr3P16150_001	Banana	mitochondrion	61.03	75.96
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.11	75.7
AT1G64190.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.73	75.36
CDY44457	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.56	75.15
Bra027685.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.39	74.95
CDY39725	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.39	74.95
KRH60004	Soybean	cytosol	61.37	74.95
KRH41276	Soybean	nucleus	63.25	74.75
AT5G41670.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.22	74.74
CDY25568	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.22	74.74
Bra025480.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.22	74.74
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.08	74.7
Solyc12g056120.1.1	Tomato	plastid	62.39	73.59
PGSC0003DMT400093802	Potato	cytosol	62.22	73.54
CDY34405	Canola	cytosol	17.44	71.83
HORVU7Hr1G006160.4	Barley	peroxisome	56.75	67.07
CDY34406	Canola	extracellular	13.33	66.1
HORVU7Hr1G006090.1	Barley	cytosol	4.62	55.1
HORVU7Hr1G006190.1	Barley	cytosol, extracellular, golgi	2.91	53.12
HORVU7Hr1G006450.1	Barley	cytosol	4.1	42.11
HORVU7Hr1G006070.1	Barley	cytosol	5.81	40.96

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:1.10.1040.10	Gene3D:1.20.5.320	Gene3D:3.40.50.720	MapMan:3.9.1.3
InterPro:6-PGluconate_DH-like_C_sf	InterPro:6PGDH_C	InterPro:6PGDH_Gnd/GntZ	InterPro:6PGDH_NADP-bd	InterPro:6PGD_dom2	UniProt:A0A287GFW2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0005975
GO:GO:0006098	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0016491	GO:GO:0019521	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G080480	EnsemblPlants:HORVU1Hr1G080480.1
InterPro:IPR013328	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00393	PFAM:PF03446	PRINTS:PR00076	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SMART:SM01350	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00873
UniParc:UPI000B467951	SEG:seg	:	:	:	:

Description

6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A287GFW2]

Coordinates

chrchr1H:+:525476773..525480502

Molecular Weight (calculated)

62657.7 Da

IEP (calculated)

8.715

GRAVY (calculated)

-0.238

Length

585 amino acids

Sequence
(BLAST)

001: SGRKRRTSWQ AGQVEAAVCG RSIRPRATRL LAPSECPPTR RRSISIPPGT LRPFPPLNLS AASPPSPSPS PSPPAPSPDS TTHEMTSPAP APPAAAAAKS
101: PPPRIGLAGL ATMGQNLALN IAEKGFPISV YNRTAAKVDS TLSRAAAEGA LPVLGHRDPR DFVLSLARPR TVVLLVQAGP AVDATIDALS PYLDAGDAIV
201: DGGNEWYQNT ERRIHQAASR GVLYLGMGVS GGEEGARNGP SLMPGGDFQA YANVRDILEK AAAQTEDGPC VTFVGPGGAG NFVKMVHNGI EYGDMQLIAE
301: AYDVLHRVGG LSNSEIADVF AEWNKGELES FLVEITADIF TVADPLDGST GGALVDKILD KTGMKGTGKW TVQQAAELAV AAPTIAASLD GRYLSGLKDE
401: RVAASSVLAE EGMPTGLLEK INVDKKVLVD NVRQALYSSK VCSYAQGMNL LRAKSVEKGW NLNLAELSRI WKGGCIIRAR FLDRIKKAYD RNPELANLIV
501: DREFAREMVQ RQGAWRWVVA RAVEAGISTP GMSASLSYFD TYRCNRLPAN LIQAQRDLFG AHTYERIDRP GSFHTEWTKL AREGK

Best Arabidopsis Sequence Match ( AT1G64190.1 )
(BLAST)

001: MESAALSRIG LAGLAVMGQN LALNIAEKGF PISVYNRTTS KVDETLDRAA VEGNLPVSGQ YSPRDFVLSI QRPRSLIILV KAGAPVDQTI DAFSEYMEPG
101: DCIIDGGNEW YQNTERRISE AEQKGLLYLG MGVSGGEEGA RNGPSLMPGG SFQAYDNIKD ILEKVAAQVE DGPCVTYIGE GGSGNFVKMV HNGIEYGDMQ
201: LISEAYDVLK NVGGLSNEEL AEIFTEWNSG ELESFLVEIT SDIFRVKDEF GDGELVDKIL DKTGMKGTGK WTVQQAAELS VAAPTIAASL DCRYLSGLKD
301: ERENAAKVLR EAGLKEEIGS ASSGIDKKRL VDDVRQALYA SKICSYAQGM NLLRAKSLEK SWNLNFGELA RIWKGGCIIR AVFLDRIKKA YQRNPDLASL
401: VVDPEFAKEM VQRQAAWRRV VGLAVSAGIS TPGMCASLAY FDTYRRARLP ANLVQAQRDL FGAHTYERTD RPGAYHTEWT KLARKNH

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SH69]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.