CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77261	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.07	33.77
Bra027685.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	96.61	23.41
CDY25568	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	96.61	23.41
AT1G64190.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	94.92	23.0
CDY39725	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	89.83	21.77
CDY44457	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	89.83	21.77
CDY43238	Canola	mitochondrion	69.49	20.35
CDY34724	Canola	mitochondrion	69.49	20.3
VIT_02s0025g00900.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.75	20.24
KRH41276	Soybean	nucleus	84.75	20.2
CDY57527	Canola	mitochondrion	68.64	20.05
PGSC0003DMT400093802	Potato	cytosol	83.9	20.0
Solyc12g056120.1.1	Tomato	plastid	83.9	19.96
GSMUA_Achr2P06120_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.41	19.24
KRH60004	Soybean	cytosol	68.64	16.91
GSMUA_Achr3P16150_001	Banana	mitochondrion	62.71	15.74
TraesCS1A01G357200.1	Wheat	unclear	66.1	15.57
TraesCS1B01G373600.1	Wheat	plastid	66.1	15.57
EES08484	Sorghum	plastid	66.1	15.48
Zm00001d049187_P001	Maize	plastid	66.1	15.38
Os11t0484500-01	Rice	plastid	64.41	14.96
TraesCS1D01G361400.1	Wheat	cytosol, mitochondrion, plastid	59.32	14.64
HORVU1Hr1G080480.1	Barley	plastid	66.1	13.33
CDY34405	Canola	cytosol	1.69	1.41

Protein Annotations

KEGG:00030+1.1.1.44	KEGG:00480+1.1.1.44	Gene3D:3.40.50.720	MapMan:35.1	InterPro:6PGDH_NADP-bd	GO:A0A078H9H1
UniProt:A0A078H9H1	EnsemblPlants:CDY34406	ProteinID:CDY34406	ProteinID:CDY34406.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004616	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0050661
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056472001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03446	PRINTS:PR00076	PANTHER:PTHR11811
PANTHER:PTHR11811:SF33	InterPro:Pgluconate_DH	SUPFAM:SSF51735	UniPathway:UPA00115	UniParc:UPI0004EE576A	:

Description

BnaA09g11480DBnaA09g11480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9H1]

Coordinates

chrLK032333:-:308263..308771

Molecular Weight (calculated)

12364.7 Da

IEP (calculated)

4.436

GRAVY (calculated)

0.003

Length

118 amino acids

Sequence
(BLAST)

001: MESAALSRIG LAGLAVMGQN LALNIAEKGF PISVYNRTTS KVDETLDRAA VEGNLPVSGQ YSPRDFVLSL QRPRSLIILV KAGAPVDQTI AAFSEYMEPG
101: DCIIDGGNEH LGESGGSG

Best Arabidopsis Sequence Match ( AT1G64190.1 )
(BLAST)

001: MESAALSRIG LAGLAVMGQN LALNIAEKGF PISVYNRTTS KVDETLDRAA VEGNLPVSGQ YSPRDFVLSI QRPRSLIILV KAGAPVDQTI DAFSEYMEPG
101: DCIIDGGNEW YQNTERRISE AEQKGLLYLG MGVSGGEEGA RNGPSLMPGG SFQAYDNIKD ILEKVAAQVE DGPCVTYIGE GGSGNFVKMV HNGIEYGDMQ
201: LISEAYDVLK NVGGLSNEEL AEIFTEWNSG ELESFLVEIT SDIFRVKDEF GDGELVDKIL DKTGMKGTGK WTVQQAAELS VAAPTIAASL DCRYLSGLKD
301: ERENAAKVLR EAGLKEEIGS ASSGIDKKRL VDDVRQALYA SKICSYAQGM NLLRAKSLEK SWNLNFGELA RIWKGGCIIR AVFLDRIKKA YQRNPDLASL
401: VVDPEFAKEM VQRQAAWRRV VGLAVSAGIS TPGMCASLAY FDTYRRARLP ANLVQAQRDL FGAHTYERTD RPGAYHTEWT KLARKNH

Arabidopsis Description

6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SH69]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.